Detail information of GWHGAAEX000607/evm.TU.scaffold_1.363


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|117586720|dbj|BAF36563.1|0NAC domain protein [Cymbidium hybrid cultivar]
Swissprottr|O49255|NAC29_ARATH9.00E-88NAC transcription factor 29
trEMBLtr|A0JBY8|A0JBY8_9ASPA0NAC domain protein {ECO:0000313|EMBL:BAF36563.1}
TAIRAT3G040709.00E-89NAC domain containing protein 47

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081455086214552907+
Transcript Sequence

Network for GWHGAAEX000607

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM541782.60E-37
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms102.710
SRR2545915Juvenile tuber41.760
SRP108465SRR5643513five period of Gastrodia elata64.710
SRR5643514five period of Gastrodia elata19.230
SRR5643515five period of Gastrodia elata66.150
SRR5643524five period of Gastrodia elata29.160
SRR5643525five period of Gastrodia elata543.100
SRR5643528five period of Gastrodia elata347.660
SRR5643658five period of Gastrodia elata671.050
SRR5643659five period of Gastrodia elata17.200
SRR5643660five period of Gastrodia elata21.250
SRR5643661five period of Gastrodia elata22.750
SRR5643662five period of Gastrodia elata91.870
SRR5643663five period of Gastrodia elata59.330
SRR5643664five period of Gastrodia elata147.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_188.580
SRR6049655Rhizomagastrodiae_C368-T10_good_145.830
SRR6049656Rhizomagastrodiae_C368-T07_good_143.700
SRR6049657Rhizomagastrodiae_C368-T07_good_1247.960
SRR6049658Rhizomagastrodiae_C368-T04_good_1299.310
SRR6049659Rhizomagastrodiae_C368-T04_good_1434.740
SRR6049660Rhizomagastrodiae_C368-T01_good_1128.190
SRR6049661Rhizomagastrodiae_C368-T04_good_1252.820
SRR6049662Rhizomagastrodiae_C368-T01_good_131.900
SRR6049663Rhizomagastrodiae_C368-T01_good_139.570
SRR6049664Rhizomagastrodiae_C368-T10_good_122.510
SRR6049665Rhizomagastrodiae_C368-T10_good_122.510
SRP279888GastroGastrodia elata tuber 117.60
JuvenJuvenile tuber26.73
Mother_GastroMother tuber of Gastrodia elata 1,314.83
Mother_JuvenMother tuber of Juvenile 939.64