Detail information of GWHGAAEX000608/evm.TU.scaffold_1.370


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743782957|ref|XP_010921285.1|1.98E-122PREDICTED: NAC domain-containing protein 68-like [Elaeis guineensis]
Swissprottr|Q52QH4|NAC68_ORYSJ1.00E-103NAC domain-containing protein 68
trEMBLtr|Q2XQF6|Q2XQF6_ELAGV2.00E-116NAC protein 1 splice variant 2 {ECO:0000313|EMBL:ABB72844.1}
TAIRAT1G017202.00E-84NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081491393214915477+
Transcript Sequence

Network for GWHGAAEX000608

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM141406.30E-36
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms78.290
SRR2545915Juvenile tuber106.810
SRP108465SRR5643513five period of Gastrodia elata96.090
SRR5643514five period of Gastrodia elata49.440
SRR5643515five period of Gastrodia elata248.720
SRR5643524five period of Gastrodia elata61.810
SRR5643525five period of Gastrodia elata87.860
SRR5643528five period of Gastrodia elata635.440
SRR5643658five period of Gastrodia elata81.930
SRR5643659five period of Gastrodia elata194.860
SRR5643660five period of Gastrodia elata56.480
SRR5643661five period of Gastrodia elata101.570
SRR5643662five period of Gastrodia elata178.780
SRR5643663five period of Gastrodia elata83.120
SRR5643664five period of Gastrodia elata212.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1209.410
SRR6049655Rhizomagastrodiae_C368-T10_good_1153.310
SRR6049656Rhizomagastrodiae_C368-T07_good_1159.320
SRR6049657Rhizomagastrodiae_C368-T07_good_1186.070
SRR6049658Rhizomagastrodiae_C368-T04_good_1183.490
SRR6049659Rhizomagastrodiae_C368-T04_good_1229.740
SRR6049660Rhizomagastrodiae_C368-T01_good_1313.050
SRR6049661Rhizomagastrodiae_C368-T04_good_1201.690
SRR6049662Rhizomagastrodiae_C368-T01_good_1116.560
SRR6049663Rhizomagastrodiae_C368-T01_good_1197.320
SRR6049664Rhizomagastrodiae_C368-T10_good_193.520
SRR6049665Rhizomagastrodiae_C368-T10_good_193.520
SRP279888GastroGastrodia elata tuber 41.17
JuvenJuvenile tuber23.05
Mother_GastroMother tuber of Gastrodia elata 567.45
Mother_JuvenMother tuber of Juvenile 648.78