Gene detail

Detail information of GWHGAAEX000611/evm.TU.scaffold_1.376

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672142760\|ref\|XP_008795243.1\|	4.74E-36	PREDICTED: uncharacterized protein LOC103711048 [Phoenix dactylifera]
trEMBL	tr\|A0A067L3N7\|A0A067L3N7_JATCU	4.00E-32	Uncharacterized protein {ECO:0000313\|EMBL:KDP43042.1}
TAIR	AT1G69210	2.00E-14	Uncharacterised protein family UPF0090

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	15497070	15513995	-

Transcript Sequence
>GWHTAAEX000611 CTATACTGTTATTATTAAAATAAAATCTTTCTCAAAAATAGAGGTGTTGTGCAAACGTGCTTCACTGCTACATTACCGTGGCGTGCTCCCGTTGAGGTGCTCTCCCGTTTAGCTCCAAGGGCGCACTATTGGGATGGATTTAGCTGTGCACACATCTCAATGGAGTCTCGCTCGATGTTTCAGTTCCACTTACGTGCCCTCTCTCCAATTTCATTCCACAAAACCCTTTGTTTTACCATTTTCATCGCGTTCTTCCTCCAAATCTCGGCATTCTCTCATCTGTAATGGCAAGAAAGGAAGTTCTTATACAAGTGCTGTTCTCATGGAACTACCATTGAAGGACCCTGAAGAAGCAAATTTTACGTTGGAAAATACGGAACAAGCTGACGAAGAATACGAAAAAGAAACAACCGAAGCGTGTACCGAGGATTTCACTGATGATATTCTGGCGAATTATAAAGCAGATTTTGACGAATGGCTCCAAGATGACGATGAAGATACTGATTTCCAAGTTGGTGATGGTGGTGAGGGAGGAGGGATTTTACTTGCTGGTACCTGGTGGGATAAGGAAGCTTTGAGATTAGCTGAAGAAGTTTCACATTCATTCGATAATGATTTGAAGTTATATGCATTCAAAACTATAAGAAACTCTAGTGTTTACTTGCGGATTGAGAAGATGTCCACCAAATATGGCTCTCCATCTTTAGAAGACATTGAGGCTTTCTATTCTGCCTTTCAGCTGCGCTTGGATAAAGCAGAGGGCGCTGGAACAATTCCAAAGGATATGTTCTTAAAGATGGGTAATATGAAATTTTCCAAATCTATTGGGATTGGAAGTGTGCTTGGAGACTGATCTTGGGAACACTCTAGTATTGAAAAAGGTGAAGCATGTGCTAAACATTTATTTCTTTCAATTGGGAGGTTAGATGGCATGGAATATTGCTGCATGTTTCGTGATGGGCAATGGAGCCAGGAGGGATACCTCACTATATCTGCCAAAGGAAAAGGTTATGCGCTGTTAGTGATTGCAGTGCAGACTGAGTAGCATTTGCAGTTGAGGCACATCATACTGAGCCACATAAGTGAGAAGGGGCTGCACTTGTTGGCCAAGAAGATCTATGGTGTGGAGAAAGGGGTTTTGAAGTAGGGCAAAAATTGCTTTGTTGGGAAGCAGACAAGAGTGACAATCAAGGGCTTGAGTCACTAAAACAAGATTTAAAGATTGGAGCTGGTGCATTTGAACACGTGCAGTTTGATGAAGACTTAGACTCTTGGAGGCTCCTTATGTTTGTTATTGTTATTGGTGATTTTTCTGGGAGAGTATGAGCTTTTACACTGAAGACTAAAGATCAGTGCGAAGTCATCCCACATTTCTTTACGATGGTGAAGCACCAGAGTGGCTTAAGGATAAACTACATGTGTACAGACAATGGTGTTGAATATTATGTGGACTTCAATGATTGCTACATGAGGTAGGGGATTTACCATCAATGGATGCCCTTGAAGGCACCATAGTTAATTGAGTTGGTTGAATGCATGAACATGGTGTTGGTAGAAAGGGTGAGGTGCTTGCTGTCTCAATCCAAGTTGCCCAAATTGTTCTAGGTGAGGCATTGAGTACAACAGTACTTGTGGATCTGTCTCCCCACATGCAGGTACAGGATCCAAGTCAGCAGTCACGTATATGTTGCTCCTCAGCTTGCCCAAATTGAACCTCGGAACGTCTGAAGCCGACTCGAGAGACAGGTTTTTCCAAGCGCCAGGGAGCGCTGTCACAGGCTTGTTTGGCCAAGGCTTGAGCACCCGGACACCTTTAGATGCCCGATGAATCTATTTGCACGGAGCCCAGGTTCCCTAAGTGCCAGGTGTCATCTCCTGGGATTGAAAGAGTTGTCAGAGTTCCTGACGATCTTGAAAGGTTTAAAGAAAAACCAATGTATGTGAAATACACAACCACTAATACTGAAAGCTACACCATTCAAGAAGCTGATGGTATTTTCAGCCTTACTTCTTTTGATCTTCATACTTCCCACTGCACTTGGGGCATAGCAGACGTGAAGATAAACAGACAGAAGGGAGGGAAGGGCAGGGCATTAAACAAGAAACAAAGGCACTGGCGGTTGCAGACACCATTTGATTCTTTGCGCCTTGTTCGTTTACACCCAGATTTTTAACGTTCTTCGCTCTATTGGGATGATTCTAAAGGTAATATATTCAGCACTGCATGACTGTAGATAAAGAAAGAGAATGATGGTTCTGGTGGACACTTGAATTGCTAAAGTTGCTGATTAGACCTGAGTGATATTGATCATTTGGCAAGCATTAGCTAGGTTACAATTGTTTATTTATAGTCTGCAAATTTTCCAATTGGGTTGTGAGATTTGATTCACTCCACAAGCTTGAGCTCAGTTGCAATTAACTATTGATCCAGCTGAATAGTCGATTATGGTTTTTTGCTTATAGTTTACTGAATGTGAGCTGACTGCCTTCCATGCTATGCTTCTGGGCTCATTGTCTGTTGGATTTATTACTGAGCAGATTTGAGTGAGCTTTATTGTTCGATTAATAGTAGAGTATGCTTGACAATATGAAGAAGTAGTTGGTTAGAGCTTTAAGCTGATCTTTTGATCAAGTGAGCATAAAATGTGTCCAAGTTGTACTCATTTTAAGCTTGAATCTGTTTGAGCAACTGATGGTTGAAATTATTTGAAAAAACAATGATTGTACTTCAAGCACAATAATTGTGTGGACAAACAAGATCAATTAATTTTGAGTTGGTTGATCTCAT

Network for GWHGAAEX000611

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.180
SRP064423	SRR2545915	Juvenile tuber	3.130
SRP108465	SRR5643513	five period of Gastrodia elata	5.590
	SRR5643514	five period of Gastrodia elata	5.370
	SRR5643515	five period of Gastrodia elata	4.580
	SRR5643524	five period of Gastrodia elata	4.990
	SRR5643525	five period of Gastrodia elata	2.780
	SRR5643528	five period of Gastrodia elata	2.200
	SRR5643658	five period of Gastrodia elata	2.900
	SRR5643659	five period of Gastrodia elata	3.870
	SRR5643660	five period of Gastrodia elata	2.870
	SRR5643661	five period of Gastrodia elata	2.920
	SRR5643662	five period of Gastrodia elata	1.990
	SRR5643663	five period of Gastrodia elata	1.580
	SRR5643664	five period of Gastrodia elata	1.780
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.190
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.670
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.360
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.940
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.890
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.570
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.550
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.400
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.170
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.850
SRP279888	Gastro	Gastrodia elata tuber	3.59
	Juven	Juvenile tuber	8.43
	Mother_Gastro	Mother tuber of Gastrodia elata	2.47
	Mother_Juven	Mother tuber of Juvenile	6.27