Gene detail

Detail information of GWHGAAEX000620/evm.TU.scaffold_1.395

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1303	4.00E-176	Amino acid transporters
nr	gi\|695057378\|ref\|XP_009416958.1\|	0	PREDICTED: amino acid permease 6-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|O80592\|AAP8_ARATH	1.00E-176	Amino acid permease 8
trEMBL	tr\|M0TYJ5\|M0TYJ5_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P08360_001}
TAIR	AT1G10010	4.00E-176	amino acid permease 8

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	16136691	16140533	+

Transcript Sequence
>GWHTAAEX000620 AAATGATGCATATCTTAAAGGTCTTCTACCATGCATCAGTTACTCATGCTATATATGAAGCAATAATATTTAATGATGAGTAGATATGCTTGCATTCGTTGCCTAAATCCGTCCCACTATTATTAATTGGCAGTTGCCACCCTATATGTATATATATAGATCTCTCCTCCGCACACTCCAACGCATTCTTACTGTATTTAGCCTCTCTTCTCCTCCGTTGCTTTCTTTGAAGAAGAAGAAGAAGAAGCTTTCTTTGAAGAAGAAGAGCAAAAGAAGGGGGGGGAGAGATGGAGAGGAGAACATCCAAGGATATTGAAGAAGGGGAACATGAAAGAAAAGGAACCATGTGGTCGGCCTCAGCCCACATTGTAGCCGCAGTGATCGGCTCGGGCGTGTTGGCACTAGCATGGAGCATGACTCAATTAGGTTGGGCCCTCGGCCCATTGGTTCTCCTCGGCTTTGCCATCGTCACATACTACACTTCCACCCTCCTAGCCGATTGTTATCGCCATCCTGACCCCATCACAGGGACAATCAATCGGGTTTACATTGAAGCTGTCCGAGCCTACCTTGGCCCTAGAGCGGTCTTCTTGTGCGGATGTGCCCAATATGTAAATCTTTGGGGCACCCTTGTAGGCTATACTGTCACAGCAGCTATTAGCATGATGGCCGTTCAGCGATCGAGCTGCATCCACCATAATGGTCATGAATCGAAATGCGAGTCCTCGGGAAACTTGTTCATGCTTGTATTCGGGGCGGTGCAAGTTGTTCTGTCACAATTCCCCAGTCTAGAGAACATTACGTGGTTGTCAGTGGTGGCAGTGATGACTTCCTTTGCCTACTCGCTCATTGGCCTTGGGCTATCAGCAGGCAAACTCATCTCCCACAAGAAGATCCAAGGCACCATATTAGGAACCTCCGGGTTATCGCACACCAACAAGACATGGAATGCTTTTCTAGCACTAGGAAATGTTGCATTTGCTTATACCTTTGCTGATGTCTTGATTGAGATTCAGGATACTTTGAAGGCACCTCCTCCAGAGAATAGAACAATGAAGCGAGCAACTTTCTTAGGAATTGGGCTAACTACAATATTCTACCTCTCGTTGGGCTGTATTGGGTATGCAGCATTTGGGAATAATGCACCAGGAAATATACTTACAGGCTTTGGATTTTTTGAACCCTTTTGGCTGGTAGATATTGCCAATATTTGCATTGTTGTTCATCTCCTTGGAGCATATCAGGTATATGCTCAACCAATTTTCGCACGCTTTGAAAAGACGCTATCAAACCGTTGGCCAGAAGCAAAATTCCTCCACATAACCTACTCCGTGAGAGTGCCCTTCACAGCATCAGGGCCACTAAGCTTCACCCTCTCCAAGCTAGTCCTCCGCTCTTGTCTCATACTCTTTACGACACTAGTGGCAATGCTTGTGCCCTTCTTTAATGCAGTGCTAGGGCTCATCGGCGCCATCGGCTTTTGGCCGCTCACTGTCTACTTCCCTGTCAACATGCACATCTCGCAGAGGAACATCATGTTTGGGCAGCCCAAATGGATTCTCCTCCAAAGCCTCAGCTTGTTCTGCCTCCTGATTTCCATAGCTACCGCCATCGGCTCTATGGCCGATATCGCAAGCAGCCTCAGGATGGCAGCTCCTTTCAAGTTGAATTATTAAGAGTCTTTCAAGATGAAAATATTAGTATGTTAAGTAGATGATTTTGTGTTGAATGTCAACATGCAGGAAGGAGATTTGGAGTTAACTACTTGGGTTGTACTTTTTAAAGATCTCTAGAATGAGTTGGAGATTACAAGACTAAGGGACTATCAGTAGGTAAAGATTAAACATGGATCATAATTGATGGGCTTATTAAGGAGCTATGTTAGCTTTTAAAAAATGGGATTGGATGTGGAAGCCAGCTAGCTAATACATGTATGCTTGAGCATACATAGGTTCATGCTTTTCTGCCTACACTTTAGCAAGCATGCTAATGCAATTATAGCTTGAATAACTGTGAAAATCAGTTTTGAATTACAAGTATATTAGTCGAATTTCCAATATGTTAGTGACTAAGACTTTAGAATTGAGATGATGGGTCTGTCCATTAATATATTAAGCTCAAGTTAAAGCAGGGGAGTATTCAATCCTTCTATTTAATTACAATTCAAAATCATGTGGCTTCCTATATATTTTACCTTTTGATAGTTAAGTTTGATTTTTCATTTGTATATATTATGCTATTGAAAAGCTACATTTTTTTAATGAATAGCATTGTGACTCAATGATTATGCAACATAATAACCTCTCATTGATGCTTAACTTCTCCCAA

Network for GWHGAAEX000620

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01490.17	Aa_trans	17	446	4.40E-99

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	51.590
SRP064423	SRR2545915	Juvenile tuber	30.300
SRP108465	SRR5643513	five period of Gastrodia elata	66.870
	SRR5643514	five period of Gastrodia elata	66.130
	SRR5643515	five period of Gastrodia elata	62.820
	SRR5643524	five period of Gastrodia elata	63.630
	SRR5643525	five period of Gastrodia elata	494.500
	SRR5643528	five period of Gastrodia elata	296.040
	SRR5643658	five period of Gastrodia elata	381.190
	SRR5643659	five period of Gastrodia elata	40.650
	SRR5643660	five period of Gastrodia elata	38.790
	SRR5643661	five period of Gastrodia elata	35.140
	SRR5643662	five period of Gastrodia elata	167.990
	SRR5643663	five period of Gastrodia elata	121.340
	SRR5643664	five period of Gastrodia elata	143.720
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	70.810
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	86.640
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	61.040
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	81.780
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	66.410
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	67.810
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	67.910
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	60.920
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	49.330
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	48.250
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	53.050
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	53.050
SRP279888	Gastro	Gastrodia elata tuber	245.78
	Juven	Juvenile tuber	57.87
	Mother_Gastro	Mother tuber of Gastrodia elata	34.95
	Mother_Juven	Mother tuber of Juvenile	50.69