Detail information of GWHGAAEX000622/evm.TU.scaffold_1.397


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG14748.00E-107Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins
nrgi|695053775|ref|XP_009414995.1|7.54E-158PREDICTED: transcription factor GTE1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q84XV2|GTE1_ARATH3.00E-111Transcription factor GTE1
trEMBLtr|M0TUN7|M0TUN7_MUSAM6.00E-152Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P29340_001}
TAIRAT2G349008.00E-107Transcription factor GTE6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081618830816218278+
Transcript Sequence

Network for GWHGAAEX000622

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00439.24Bromodomain1462312.50E-19
PF17035.4BET3073676.50E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.400
SRR2545915Juvenile tuber14.700
SRP108465SRR5643513five period of Gastrodia elata10.950
SRR5643514five period of Gastrodia elata10.530
SRR5643515five period of Gastrodia elata9.870
SRR5643524five period of Gastrodia elata10.440
SRR5643525five period of Gastrodia elata8.590
SRR5643528five period of Gastrodia elata11.680
SRR5643658five period of Gastrodia elata9.240
SRR5643659five period of Gastrodia elata9.660
SRR5643660five period of Gastrodia elata12.800
SRR5643661five period of Gastrodia elata12.640
SRR5643662five period of Gastrodia elata10.900
SRR5643663five period of Gastrodia elata13.460
SRR5643664five period of Gastrodia elata11.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.470
SRR6049655Rhizomagastrodiae_C368-T10_good_16.600
SRR6049656Rhizomagastrodiae_C368-T07_good_18.270
SRR6049657Rhizomagastrodiae_C368-T07_good_110.270
SRR6049658Rhizomagastrodiae_C368-T04_good_16.650
SRR6049659Rhizomagastrodiae_C368-T04_good_17.310
SRR6049660Rhizomagastrodiae_C368-T01_good_18.330
SRR6049661Rhizomagastrodiae_C368-T04_good_16.190
SRR6049662Rhizomagastrodiae_C368-T01_good_18.040
SRR6049663Rhizomagastrodiae_C368-T01_good_17.810
SRR6049664Rhizomagastrodiae_C368-T10_good_111.970
SRR6049665Rhizomagastrodiae_C368-T10_good_111.970
SRP279888GastroGastrodia elata tuber 17.84
JuvenJuvenile tuber19.02
Mother_GastroMother tuber of Gastrodia elata 17.66
Mother_JuvenMother tuber of Juvenile 20.52