Detail information of GWHGAAEX000634/evm.TU.scaffold_1.423


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10120Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain
nrgi|743829215|ref|XP_010934086.1|0PREDICTED: synaptotagmin-4-like isoform X1 [Elaeis guineensis]
Swissprottr|Q8L706|SYT5_ARATH1.00E-97Synaptotagmin-5
trEMBLtr|W1NLZ4|W1NLZ4_AMBTC0Uncharacterized protein {ECO:0000313|EMBL:ERM96541.1}
TAIRAT3G610500Calcium-dependent lipid-binding (CaLB domain) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081876898618789526+
Transcript Sequence

Network for GWHGAAEX000634

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17047.4SMP_LBD682476.20E-17
PF00168.29C22633562.60E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008289Molecular Functionlipid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.420
SRR2545915Juvenile tuber10.240
SRP108465SRR5643513five period of Gastrodia elata10.080
SRR5643514five period of Gastrodia elata14.610
SRR5643515five period of Gastrodia elata9.900
SRR5643524five period of Gastrodia elata11.720
SRR5643525five period of Gastrodia elata21.300
SRR5643528five period of Gastrodia elata19.950
SRR5643658five period of Gastrodia elata20.690
SRR5643659five period of Gastrodia elata10.800
SRR5643660five period of Gastrodia elata8.400
SRR5643661five period of Gastrodia elata10.650
SRR5643662five period of Gastrodia elata6.540
SRR5643663five period of Gastrodia elata8.940
SRR5643664five period of Gastrodia elata8.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.730
SRR6049655Rhizomagastrodiae_C368-T10_good_111.280
SRR6049656Rhizomagastrodiae_C368-T07_good_17.280
SRR6049657Rhizomagastrodiae_C368-T07_good_16.000
SRR6049658Rhizomagastrodiae_C368-T04_good_12.070
SRR6049659Rhizomagastrodiae_C368-T04_good_12.140
SRR6049660Rhizomagastrodiae_C368-T01_good_12.900
SRR6049661Rhizomagastrodiae_C368-T04_good_14.150
SRR6049662Rhizomagastrodiae_C368-T01_good_15.200
SRR6049663Rhizomagastrodiae_C368-T01_good_12.660
SRR6049664Rhizomagastrodiae_C368-T10_good_110.900
SRR6049665Rhizomagastrodiae_C368-T10_good_110.900
SRP279888GastroGastrodia elata tuber 4.17
JuvenJuvenile tuber4.50
Mother_GastroMother tuber of Gastrodia elata 16.15
Mother_JuvenMother tuber of Juvenile 14.44