Detail information of GWHGAAEX000640/evm.TU.scaffold_1.438


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672144779|ref|XP_008796292.1|1.06E-168PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103711790 [Phoenix dactylifera]
trEMBLtr|F6HED1|F6HED1_VITVI3.00E-99Putative uncharacterized protein {ECO:0000313|EMBL:CCB50577.1}
TAIRAT3G028902.00E-43RING/FYVE/PHD zinc finger superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000082021599420246172-
Transcript Sequence

Network for GWHGAAEX000640

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00628.28PHD4094577.10E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPHD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.410
SRR2545915Juvenile tuber36.600
SRP108465SRR5643513five period of Gastrodia elata22.310
SRR5643514five period of Gastrodia elata25.610
SRR5643515five period of Gastrodia elata24.320
SRR5643524five period of Gastrodia elata24.260
SRR5643525five period of Gastrodia elata23.080
SRR5643528five period of Gastrodia elata22.170
SRR5643658five period of Gastrodia elata21.980
SRR5643659five period of Gastrodia elata23.980
SRR5643660five period of Gastrodia elata24.720
SRR5643661five period of Gastrodia elata21.850
SRR5643662five period of Gastrodia elata22.180
SRR5643663five period of Gastrodia elata24.240
SRR5643664five period of Gastrodia elata26.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.870
SRR6049655Rhizomagastrodiae_C368-T10_good_122.980
SRR6049656Rhizomagastrodiae_C368-T07_good_122.450
SRR6049657Rhizomagastrodiae_C368-T07_good_121.150
SRR6049658Rhizomagastrodiae_C368-T04_good_123.180
SRR6049659Rhizomagastrodiae_C368-T04_good_125.090
SRR6049660Rhizomagastrodiae_C368-T01_good_122.540
SRR6049661Rhizomagastrodiae_C368-T04_good_123.240
SRR6049662Rhizomagastrodiae_C368-T01_good_120.650
SRR6049663Rhizomagastrodiae_C368-T01_good_124.130
SRR6049664Rhizomagastrodiae_C368-T10_good_123.710
SRR6049665Rhizomagastrodiae_C368-T10_good_123.710
SRP279888GastroGastrodia elata tuber 26.22
JuvenJuvenile tuber30.35
Mother_GastroMother tuber of Gastrodia elata 24.47
Mother_JuvenMother tuber of Juvenile 38.53