Gene detail

Detail information of GWHGAAEX000645/evm.TU.scaffold_1.449

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|108762507\|ref\|YP_633329.1\|	1.00E-30	serine/threonine protein kinase [Myxococcus xanthus DK 1622]
KOG	KOG0198	0	MEKK and related serine/threonine protein kinases
nr	gi\|695074125\|ref\|XP_009384252.1\|	0	PREDICTED: serine/threonine-protein kinase sepA-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q40541\|NPK1_TOBAC	3.00E-69	Mitogen-activated protein kinase kinase kinase NPK1
trEMBL	tr\|M0RTI5\|M0RTI5_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P19050_001}
TAIR	AT3G13530	0	mitogen-activated protein kinase kinase kinase 7

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	21059327	21148975	-

Transcript Sequence
>GWHTAAEX000645 GGGTTGATGATCTGGTTCAGCCCCATCAGCCTTAACTTCATCACCCAACTCTTTGTTAATGATCGCCACAAATCACCCTCCGGTTCTTCCCCACCACCCCTTATCTTAATTTAGCTACTACCGAGCAGTTCCACCGCTATCGGAGCTCCATTTCTTCCATCCGTTTCTGCTTTCTAACGTTATTGACGCCGGATCTGCTGGTTTCAATCGGTTCCCTAGTTCTTTGATCGTTACACTTCGATCGGCTGTGATTTCAGTCCTCGTTTTTTTTTTTTATTGAAAAACAAACCCGTTTGCATATGTTTTTGATTACACGTTTCTCCCAGTCGTGCTTCGCTTTGGTGCTGTGGTAGGGTTTGGTATTTCTTAATTCCAGTTCTCCAGTGTTAAATTCATGTTCCAGGCATGTCTCGGCATCCTGCTACCGCCCATTTCCATAAATCGAAAACGCTCTACGACAAATATATGCTTGGAGATGAGATCGGAAAAGGAGCGTATGGTCGCGTTTATAAGGGTCTTGACCTGGAAAATGCAGATTTTGTGGCAATCAAGCAGGTGTCCTTGGAGAATATTCCGCAGGAGGATCTTAACATAATAATGCAAGAAATCGACTTGCTAAAGAATCTCAACCACAAAAATATTGTGAAGTACCTTGGTTCATTAAAGACAAAGACTCACCTGCATATCATTCTAGAGTATGTTGAAAATGGTTCACTCGCTAACATTATCAAGCCCAACAAATTTGGACCTTTTCCAGAGTCATTGGTAGCTGTTTATATTTCCCAGGTTTTAGAAGGTTTGGTTTATTTGCATGAACAAGGGGTCATTCACCGAGACATCAAGGGTGCAAACATTTTAACAACTAAAGAGGGCCTTGTTAAGCTTGCTGACTTTGGTGTTGCAACAAAGTTAAATGAAGCAGATCTTAACACACATTCAGTTGTTGGAACACCTTACTGGATGGCTCCAGAGGTCATTGAAATGTCCGGAGTTTGTGCTGCATCAGATATTTGGAGTGTTGGCTGCACTGTTATTGAGCTACTTACGTGTGTTCCTCCCTATTATGATCTTCAACCAATGCCAGCTCTGTTTCGAATTGTGCAGGACCCCCATCCTCCAATACCTGAAGGACTATCTGCTGACATTACCGATTTTCTACGACAATGCTTCAAAAAGGATGCAATGCAAAGGCCAGATGCAAGAACATTGTTACAGCATCCATGGATTTTGAACACAAGACGTTTTCTGCAGTCTTCTCTCCGTCAAATAGGTGGCTCGATTAGGAACATTGATGAAGAAGTTGCAATCACTGATAGGAATTCAGCTGGTAACCATCTTAGTATTGAAAATTCATCCGAGGGTAGAATCAAGTCTGATGATGCCGACATGGAGCAAGAGAACTCCAGAAGGGATTATTTGGCTTCCTGTTCTTTTGAAAGAAATGGCTTTGACGAGAGCCAAGGTGGAAAAAATAGCATTAGACAAGATACTTCCCCAGAAATTGCTGATAGTCTAAAAGATGACTTGATTTATGCTAGAGATCCTACTTTAGTTTTACTTCAAAAGCCAATAATGTGCTCATCAACTGCTAATGAAGCCTCTACCGTGGATTCAGAGACATGCAAGGATCCTTGCCAGGACGCAGTTGATGGGCTGGTGAGCATCCCTGTAGTCAATGTAGAAAATGATTTTGCTGTTGAACAAGGCAATGAAGGAAGCTCTAACTATGATGAAAGTAATTTATTTTCTTTTGGGACCAGAATGCCAAAAGTCATTTCTCATAAAGCCGTGAAGCCCTCAGCTGTATCTGGTGTTCGAGAGTTGAGTCGATTTAGTGATTCTCCAGGAGATGCTTCGCTGGAGGATTTATTTCAGCCATTAGATAGGCCTCCAGGAGATCAAGTTGCTGAAGCTTCAACTCCTGCCAGTTCTCATGGGAATTTATTATATGATGGTGCTAAAAGTGACCTGGCAAAGGAACTCAAGGCTAGAATAACTCAGAAACATACAGAAAGTCAAATTGAACACCAGAAGGGTGGGAAGCTTCTAGAGTATGTAAGGGATGTGATTGACATCGATGGTCCGGTGTTTGAGGAAAATTTACCTGCTGAGAACATTTTCCTTATTCAGTCTGTAGAGTTCAGTAAGTTAGTTGGATTGCTGAAGCCAGAAGAGCCAGATGATGTGATTTTGTCTGCATGCCAAAAGCTTCTTACATTCTTTGTTCAGCGTCCAGAGCAAAAGCATACTTTCATGTCCCAACATGGGTTTCTTCCTCTTATGGATCTTCTTGAAATTCCAAGAAACCGAGTCATTTGTTCTGTGCTTCAGATAATCAACCAGATTATCATGGATAATGTTAGTTTCCAAGAAAATGCTTGCCTTGTGGGACTTATTCCAGTGGTAATGAATTTTGCAGTACCTGATCGCCCTCGAGAACTTAGGATGCAAGCAGCTTTCTTTCTTCAGCAGCTTTGCCATTCTAGTACTTTAACATTGCAAATGTTTATTGCCTGTCGGGGTATACCAGTTCTTGTGGGTTTCCTTGAGGCTGATTATGCTAAGTATAGGGAAATGGTTCATCTTGCGATAGATGGCATATGGCAGGTATTTAACCTTCAGCATTCCACTCCAAGAAATGACTTCTGTCGTATAGCTGCCAAGAATGGAATTCTTCTCAGGATCGTGAACGCCCTTCACAGTTTGAATGAAGCTACTCGATTGACATCTGTGCAAAGTGGTATAGTTGCAAGACCTAAATCTGGGCCATTAGATAATACGCTATCAGTTGGATCAGCAGAATCACTGCATGCATCATCTTCAACTTCAGGAGCTGATGCAACTTTGTTGGACACAAAACAGCTTTCCGGAGATGCTGCATTTGAGGAGCATGACCATTTGGGTTTGTGGAAGCCTGATATTTCCCAATTGGAAGCTGATCTAATTAGACAGCAAAGTACTACTAATTCTACCTGTAGAACTTCTGTTGATAAACCTTTAAAATATGTGGAAATTGCATCAAACGGAAATTCTACTGCTGGGAACTTCTTTTCTTCTCAAAGGGAGCATGTGCGTCCGCTGTTGAGTTTATTAGACAAAGAACCACCTTCTCGAAATGTCTCAGGGCAGCTTGATTGTGTGAGCAGTCTTCCTGCACTAGAAAGACATGAAAGCATACTGCCTCTTCTTCATGCTTCAACAGAAAAGAAAACTAATGGAGAATTTGATCTTCTGATGGCAGAATTTGCTGAGGTCTCTAGACAAGGGAGGGAGAAGGAGCATTCAGAATTTAATGGAAAACCATCCAGGAGAATGAACAAGAAGGTTTCAGCACAATCCATGGGCTCAACCATTTCGAATGAGGGCGCTTCGACTTCTGGCATTGCTTCTCAGACAACATCAGGAGTGCTTTCTGGATCCGGCGTTTTGAACGCGAGAGCAGGGAGCACCACATCCTCCGGACTACTCTCACAGATGATCTCATCCCTGAATGCTGATGTGGCAAGAGAATATCTCGAAAAGGTTGCAGATCTATTATTTGAATTTGCTCAAGCCGATTCCACTGTAAAAACTTACATGTGCAGCCAAAGCTTGCTTACTCGGCTCTTCCAAATGTTCCACAAGATAGAGCCTCCTATTCTTCTCAAGGTACTGAAGTGCGTCAATCAACTTTCTGGGGATCCTAATTGTTTGGAGTATCTTCAGCGTGCAGATTCAATCAAGCATTTGATTCCTAACCTTGAAATTCATGATGTTCCTTTTGCCTCTCAAATACATATTGAAGTCCTCAGCGCACTGTTTAATCTTTGCAAAATCAACAAGAGGAGACAGGAACAAGCGGCAGAGAATGGAATCATTCCGCATCTGATGAAATTCCTTGCATCGGATTCGTCATTGAGGCACTGTGCACTTCCGCTCCTCTGTGACATGGCTCACGCATCCCGAAACTCGAGGGAGCAGCTTAGGATTCACGGCGGATTGGACGTGTACCTGAATTTGTTGGAGGATGAAGTCTGGGCCGTCACCGCCCTTGATTCCATTGCCGTGTGCTTGGCCCATGACAACGACCATCGGAAAGTCGAACAAGCCCTTCTTAGGAAAGACTCCATCTACCGCCTAGTCACTTTCTTCCGGAACTGTCCGGAACAGTATTTTGTCAACATTCTGGAACCTTTTCTGAAGATCATCACTAAATCAGCTCGGATAAATACTGCAATGGCCACTAGTGGTCTCACCACCCTTCTTATTTCAAGATTGGAACATCAGGATGCTATTGCCAGACTTAATCTCTTAAAATTAATCAAGGCCGTTTATGAGCATCACCCAAGGCCAAAGCAGCTCATAGTAGAAAATGACCTCCCGCAAAAGCTCCAGAATTTGATCGAGGAGAGGAGGAACGGACAGAGGTCCGGAGGCCAGGTTCTGGTCAAGCAAATGGCCACTGCGCTTGTAAAAGCTCTTCATATCAACACTGTTCTGTAGATATTCCGATTGAATTTTCTTCATTTGTATATCTATTTTTGAATGTGTTCCTCAAATGTAATCATATATATATAGCTGTGTGTCAGCGCGCTCCGCGTGTGTTTGTATGTGCACATACATATTTTTTTTGCATTAGAGTTAAATTTTGCGCAGGCTTTTATGTATCATTTTAAGCAAGCTTTAAAGTTTTTTTTATTTGTACAAGAATTAAAACTTTATACTGTTCTTCTCAGAATGTGAAAATTCCCTGATAAATTTTAAGTAAATATGACTACTGAACTCAAATATTTTTAATGTCT

Network for GWHGAAEX000645

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	21	274	4.10E-72

Protein Sequence

>GWHPAAEX000645
MSRHPATAHFHKSKTLYDKYMLGDEIGKGAYGRVYKGLDLENADFVAIKQVSLENIPQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLNEADLNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDPHPPIPEGLSADITDFLRQCFKKDAMQRPDARTLLQHPWILNTRRFLQSSLRQIGGSIRNIDEEVAITDRNSAGNHLSIENSSEGRIKSDDADMEQENSRRDYLASCSFERNGFDESQGGKNSIRQDTSPEIADSLKDDLIYARDPTLVLLQKPIMCSSTANEASTVDSETCKDPCQDAVDGLVSIPVVNVENDFAVEQGNEGSSNYDESNLFSFGTRMPKVISHKAVKPSAVSGVRELSRFSDSPGDASLEDLFQPLDRPPGDQVAEASTPASSHGNLLYDGAKSDLAKELKARITQKHTESQIEHQKGGKLLEYVRDVIDIDGPVFEENLPAENIFLIQSVEFSKLVGLLKPEEPDDVILSACQKLLTFFVQRPEQKHTFMSQHGFLPLMDLLEIPRNRVICSVLQIINQIIMDNVSFQENACLVGLIPVVMNFAVPDRPRELRMQAAFFLQQLCHSSTLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGIWQVFNLQHSTPRNDFCRIAAKNGILLRIVNALHSLNEATRLTSVQSGIVARPKSGPLDNTLSVGSAESLHASSSTSGADATLLDTKQLSGDAAFEEHDHLGLWKPDISQLEADLIRQQSTTNSTCRTSVDKPLKYVEIASNGNSTAGNFFSSQREHVRPLLSLLDKEPPSRNVSGQLDCVSSLPALERHESILPLLHASTEKKTNGEFDLLMAEFAEVSRQGREKEHSEFNGKPSRRMNKKVSAQSMGSTISNEGASTSGIASQTTSGVLSGSGVLNARAGSTTSSGLLSQMISSLNADVAREYLEKVADLLFEFAQADSTVKTYMCSQSLLTRLFQMFHKIEPPILLKVLKCVNQLSGDPNCLEYLQRADSIKHLIPNLEIHDVPFASQIHIEVLSALFNLCKINKRRQEQAAENGIIPHLMKFLASDSSLRHCALPLLCDMAHASRNSREQLRIHGGLDVYLNLLEDEVWAVTALDSIAVCLAHDNDHRKVEQALLRKDSIYRLVTFFRNCPEQYFVNILEPFLKIITKSARINTAMATSGLTTLLISRLEHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPQKLQNLIEERRNGQRSGGQVLVKQMATALVKALHINTVL

Gene family

Gene family	subfamily
Protein Kinases Family	STE_STE-Pl

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	59.980
SRP064423	SRR2545915	Juvenile tuber	62.410
SRP108465	SRR5643513	five period of Gastrodia elata	35.060
	SRR5643514	five period of Gastrodia elata	38.010
	SRR5643515	five period of Gastrodia elata	38.150
	SRR5643524	five period of Gastrodia elata	35.610
	SRR5643525	five period of Gastrodia elata	50.350
	SRR5643528	five period of Gastrodia elata	35.660
	SRR5643658	five period of Gastrodia elata	55.500
	SRR5643659	five period of Gastrodia elata	40.970
	SRR5643660	five period of Gastrodia elata	40.320
	SRR5643661	five period of Gastrodia elata	33.920
	SRR5643662	five period of Gastrodia elata	39.510
	SRR5643663	five period of Gastrodia elata	40.120
	SRR5643664	five period of Gastrodia elata	43.950
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	50.580
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	44.490
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	45.530
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	53.440
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	49.570
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	56.270
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	51.980
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	49.860
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	37.340
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	40.160
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.820
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.820
SRP279888	Gastro	Gastrodia elata tuber	46.14
	Juven	Juvenile tuber	47.85
	Mother_Gastro	Mother tuber of Gastrodia elata	45.43
	Mother_Juven	Mother tuber of Juvenile	47.70