Detail information of GWHGAAEX000648/evm.TU.scaffold_10.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383785752|ref|YP_005470321.1|1.00E-29broad-specificity cellobiase [Fervidobacterium pennivorans DSM 9078]
KOGKOG06263.00E-37Beta-glucosidase, lactase phlorizinhydrolase, and related proteins
nrgi|641868563|gb|KDO87247.1|1.27E-39hypothetical protein CISIN_1g0121812mg, partial [Citrus sinensis]
Swissprottr|B7F8N7|BGL02_ORYSJ2.00E-39Beta-glucosidase 2 (Precursor)
trEMBLtr|A0A067HH42|A0A067HH42_CITSI5.00E-40Uncharacterized protein {ECO:0000313|EMBL:KDO87251.1} (Fragment)
TAIRAT1G602703.00E-37beta glucosidase 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000690637226-
Transcript Sequence

Network for GWHGAAEX000648

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00232.17Glyco_hydro_1811623.80E-30
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01188E3.2.1.21 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.140
SRR2545915Juvenile tuber0.860
SRP108465SRR5643513five period of Gastrodia elata4.500
SRR5643514five period of Gastrodia elata5.520
SRR5643515five period of Gastrodia elata5.580
SRR5643524five period of Gastrodia elata3.490
SRR5643525five period of Gastrodia elata2.530
SRR5643528five period of Gastrodia elata1.750
SRR5643658five period of Gastrodia elata2.470
SRR5643659five period of Gastrodia elata10.560
SRR5643660five period of Gastrodia elata7.060
SRR5643661five period of Gastrodia elata7.330
SRR5643662five period of Gastrodia elata6.590
SRR5643663five period of Gastrodia elata12.090
SRR5643664five period of Gastrodia elata7.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.620
SRR6049655Rhizomagastrodiae_C368-T10_good_13.710
SRR6049656Rhizomagastrodiae_C368-T07_good_10.720
SRR6049657Rhizomagastrodiae_C368-T07_good_11.470
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.180
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.660
SRR6049663Rhizomagastrodiae_C368-T01_good_10.320
SRR6049664Rhizomagastrodiae_C368-T10_good_15.280
SRR6049665Rhizomagastrodiae_C368-T10_good_15.280
SRP279888GastroGastrodia elata tuber 13.85
JuvenJuvenile tuber6.60
Mother_GastroMother tuber of Gastrodia elata 1.97
Mother_JuvenMother tuber of Juvenile 3.61