Detail information of GWHGAAEX000650/evm.TU.scaffold_10.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|567154675|ref|XP_006417846.1|1.59E-82hypothetical protein EUTSA_v10009726mg [Eutrema salsugineum]
Swissprottr|Q9LMK2|LSH6_ARATH4.00E-83Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6
trEMBLtr|V4KXZ4|V4KXZ4_EUTSA6.00E-83Uncharacterized protein {ECO:0000313|EMBL:ESQ36199.1}
TAIRAT1G070901.00E-82Protein of unknown function (DUF640)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000006579072579623+
Transcript Sequence

Network for GWHGAAEX000650

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04852.11DUF640251476.80E-64
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.170
SRR2545915Juvenile tuber22.480
SRP108465SRR5643513five period of Gastrodia elata88.830
SRR5643514five period of Gastrodia elata88.220
SRR5643515five period of Gastrodia elata58.080
SRR5643524five period of Gastrodia elata63.960
SRR5643525five period of Gastrodia elata50.770
SRR5643528five period of Gastrodia elata24.220
SRR5643658five period of Gastrodia elata48.640
SRR5643659five period of Gastrodia elata303.380
SRR5643660five period of Gastrodia elata314.900
SRR5643661five period of Gastrodia elata386.800
SRR5643662five period of Gastrodia elata349.410
SRR5643663five period of Gastrodia elata405.950
SRR5643664five period of Gastrodia elata340.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1142.870
SRR6049655Rhizomagastrodiae_C368-T10_good_1176.750
SRR6049656Rhizomagastrodiae_C368-T07_good_1157.240
SRR6049657Rhizomagastrodiae_C368-T07_good_1165.360
SRR6049658Rhizomagastrodiae_C368-T04_good_189.370
SRR6049659Rhizomagastrodiae_C368-T04_good_188.290
SRR6049660Rhizomagastrodiae_C368-T01_good_196.040
SRR6049661Rhizomagastrodiae_C368-T04_good_1108.500
SRR6049662Rhizomagastrodiae_C368-T01_good_170.900
SRR6049663Rhizomagastrodiae_C368-T01_good_150.890
SRR6049664Rhizomagastrodiae_C368-T10_good_1130.090
SRR6049665Rhizomagastrodiae_C368-T10_good_1130.090
SRP279888GastroGastrodia elata tuber 344.72
JuvenJuvenile tuber113.11
Mother_GastroMother tuber of Gastrodia elata 69.64
Mother_JuvenMother tuber of Juvenile 62.23