Detail information of GWHGAAEX000668/evm.TU.scaffold_10.29


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000618635851876133+
Transcript Sequence

Network for GWHGAAEX000668

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module10

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00609pyrB, PYR2 Metabolic pathways map01100
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.410
SRR2545915Juvenile tuber6.430
SRP108465SRR5643513five period of Gastrodia elata2.600
SRR5643514five period of Gastrodia elata1.740
SRR5643515five period of Gastrodia elata1.210
SRR5643524five period of Gastrodia elata3.910
SRR5643525five period of Gastrodia elata0.750
SRR5643528five period of Gastrodia elata1.330
SRR5643658five period of Gastrodia elata1.510
SRR5643659five period of Gastrodia elata1.820
SRR5643660five period of Gastrodia elata1.450
SRR5643661five period of Gastrodia elata1.740
SRR5643662five period of Gastrodia elata0.890
SRR5643663five period of Gastrodia elata1.760
SRR5643664five period of Gastrodia elata0.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.540
SRR6049655Rhizomagastrodiae_C368-T10_good_113.750
SRR6049656Rhizomagastrodiae_C368-T07_good_11.530
SRR6049657Rhizomagastrodiae_C368-T07_good_13.830
SRR6049658Rhizomagastrodiae_C368-T04_good_12.320
SRR6049659Rhizomagastrodiae_C368-T04_good_13.890
SRR6049660Rhizomagastrodiae_C368-T01_good_12.940
SRR6049661Rhizomagastrodiae_C368-T04_good_13.970
SRR6049662Rhizomagastrodiae_C368-T01_good_11.090
SRR6049663Rhizomagastrodiae_C368-T01_good_16.140
SRR6049664Rhizomagastrodiae_C368-T10_good_15.840
SRR6049665Rhizomagastrodiae_C368-T10_good_15.840
SRP279888GastroGastrodia elata tuber 0.85
JuvenJuvenile tuber1.45
Mother_GastroMother tuber of Gastrodia elata 0.54
Mother_JuvenMother tuber of Juvenile 1.08