Gene detail

Detail information of GWHGAAEX000674/evm.TU.scaffold_10.37

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|156938218\|ref\|YP_001436014.1\|	1.00E-62	ATPase AAA [Ignicoccus hospitalis KIN4/I]
KOG	KOG0732	0	AAA+-type ATPase containing the bromodomain
nr	gi\|672157035\|ref\|XP_008798209.1\|	0	PREDICTED: uncharacterized protein LOC103713162 [Phoenix dactylifera]
Swissprot	tr\|F4IAE9\|Y1591_ARATH	1.00E-75	ATPase family AAA domain-containing protein At1g05910
trEMBL	tr\|M0RZP5\|M0RZP5_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P13870_001}
trEMBL	tr\|M0RZP5\|M0RZP5_MUSAM	2.00E-07	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P13870_001}
TAIR	AT3G15120	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000006	2135007	2165068	-

Transcript Sequence
>GWHTAAEX000674 GTTTGATCTAGGGCACTGCGACTCTGCCTTCAGCCCGTCACCTAGAAGGATCCCGCAACCGAGCAGTTGCTCCATGGCGTTTGAGAAAGCCACCCGATATAAAATCCTTCCCAATAACTATCCGCACTTTCTCTAGAGTTTCGTCTTATACGCTCGCGCCCCTCTCGCTTTCTGCTGATGACTTATTCTCTACGGTCTGAGTCAACTCCTCCGGCTCCGGCGAAGAGGTGCCGGGAGTTGCACTACCGATCTAAGGCCAGGAAGAAGCACAAGCGGCTCGATGCCATCCATGACGAGCCCTCAGCGTCCTACATCGCTCACCGCAATGTAGCCGATGATGACATTGCTATTCTCCGTCGCAGCTCCCGCGTTCGTCGCCCCCCTGATTTACTGGACTCTTCCCCCGTTCCCTTCGTCCGCAGGAAGAGGTTTAATGATCTCGATTCTCCCTGCGGCAGCAGTGAGCTAAAGAGGGAAACGTCGACGGGGAAGGAGAAAGAAGAACCTGCTTTCCAGGCAGCTTCTTCGCTGGGTGAAGATGGGGACTGGATGTCGAGACTGCGGACTAGGGCTGGGAACGGAAGAGAAAAGTTATTATCTTCATTGCGGGAGCTTAATGCGGGCTTGAATGAAGCGAAGACGCTTTTGCCAGTTATGGGAGAGAAGAATGTTGGAATGGTTACCTCATTCAGGAGCAGTCGGAGATGGAAAAAGATTTCTCCCCAAGCTGGTAACAAAGATGATATGCTACCGTTGGTAGACAAAGATTACGCCATTGACCAACTTGCAGAGAGAATTTATCAGGAAGGTGTAGTCAACGTGCCTGTGAATGTTCAGATTGCCAGTGAGGAAGCTGGGATGTTGGAAAACGCTGATAAAGTTACTGGGTTTACAGAAGAGGCTGAATGTGTAAAGAAATGCATTCATGATGGAAGAACTCAGTATATATTTGCAGTAGGTGAGACTTTTTCTCTTCAGTCACAGGGAACAGAGGAGCATGGTTCCAAAGATCATGATTCCAGCCAATCTGACAAACATCCTGAGTCCATTGATGCTGTAGAGAGGGATGATGCTTTGAAGGATAATATTCAAGAGACTGAACACACTTTGAAAGATGATGGCGTACTAGCTTCTGTGCCAGTTGAGAAGGTTGCAAGTTTAAGGGTAAAAGAAGGAAGGAGGTGTGGCTTGTGTGGGTGCGGGACGGATGGGAAACCTCCCAAAAAGCTGGTCAATGAATCTTTTGATAGTGAAAATGAGGCTTATGACGGATCCACAGCTTCAGATGAACCTAACTACAATGTTTGGGATGGGTTTGGAGATGAACCTGGGTGGCTTGGCAGGCTTTTGGGACCCTTACTTGATCGTTTTGGCATTGCTCGTGTTTGGGTTCACCAACATTGTGCTGTTTGGAGTCCAGAGGTCTACTTTGCCGATTTGGGATGTTTGAAGAATGTCAGAGCTGCACTATGCCGGGGAAGAGCATTAAAATGTAGTCGCTGTGGAAGGCCTGGAGCAACCATTGGCTGTCGCGTTGATCGGTGTCCCAAAACTTATCACTTGCCTTGCAGCCGTATAGAGGGTTGCATATTTGATCATCATAAGTTTCTCATTGCATGCAGCGACCATAGGCGTTTCTTCCAGCCACATGGGCATAAACACGCTCTTCAAATAAGGAAAATGAAAACTAAAAAATCGAGGTTGGATTTGCGAAAAGTCTCAAATGAAGCTAGGCGAAAGGATTTAGAAGCTGAAGAGAAGTGGTTAGAGAATTGTGGAGAAGATGAAGAGTTCTTGAGAAGGGAAGGCAGAAGACTTCATCGTGATATCCTTAGAATTGCACCAATCTACATTGGCGGCTCTTCTGAAAATGAAAATATGTACCAGGGTTGGGAATCTGTGGCAGGGCTAGAACATGTCATTCAATGCATGAAGGAAGTAGTTCTATTACCTCTCTTATATCCGGAGTTTTTCATTAATTTGGGTCTTATTCCTCCTAGAGGAATTCTTTTGCATGGTAATCCTGGTACTGGGAAGACACATGTGGTGCGTGCTTTAATTGGGGCCTGCTCTCGTGGTGATAAGAGAATAGCATATTTTGCTCGCAAAGGTGCTGATTGTTTGGGTAAGTATGTGGGTGATGCTGAGCGTCAGTTAAGGCTACTTTTTCAAGTGGCAGAAAAATCTCAACCATCTATAATTTTTTTTGATGAGATTGATGGTTTAGCTCCATGCCGCTCTAAGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACGCTGCTTTCATTGCTTGATGGATTGAAATCCCGTGGTTCAGTTATTGTAATAGGTGCTACTAACCGCCCAGATGCTGTCGATCCTGCATTAAGAAGGCCCGGGAGATTTGACAGAGAGATATATTTTCCGCTGCCCACAGAGATGGATAGATCTTCAATTCTGTCGCTTCATACCCGAAGTTGGCCCAAACCTTTGTCTGGATCTCTTCTTTCTTGGATTGCCAATCAGACTGTTGGTTTTGCTGGAGCTGATCTTCAGGCACTTTGTGCTCAAGCTGCTATGTATGCATTAAAAAGGAACTGTGCTTTGCAGAAACTTCTGTCTTATGCTGCAAAGGGTACCATTCAAGGGAAGCTTCCTAATCTGCCATCATTTCATGTGGAGGAAAGGGACTGGCTGGCAGCTCTCACTTTAGTACCCCCTCCATGTTCTCGAAGGGAGGCAGGTATAGCTGTAAATGATATAGTTGCTTCACCTCTCCCCGTTGATCTTGTTTCATGCCTTCTACTACCACTAACAAAGTTTCTTGTGTCACTGTATATTGATGAACAAGTTTGGCTATCTCCTATGCTTTTTATGGCTTCAAAATCTGTTAAAAATGTTGTAGTTTCGGCTTTGGAGCAAAAGGGTGTACCCGTGACCTTTTGGTGGTCTCACATAGATGCTCTGATTCAGGAGCCTTTATTTGCTGAAAAAATAAAAAATAAGCTTGTTCAATATGGTCTTGTGTATTGCCCATCGGGATTCAATTACCTTATGTCGTTGGATGAGGTTGATGATGAATCTAGTGAAAATGAAACTACTGATTCCTTTGGAATGCGAACATGTGGTGCATTTATGCATAGGAAGTTGATGCAAAAGAGTCTTCTTCAAGCTGGAAAATCCCGGGGATTTCGTATTATTATATCTGGAGCCCCAAGATGCGGTCAACAACATCTTGCTAGTTGTCTTCTTCAAGGATTCATGGGGCATAAAGAGATTCTGAAGGTTAGTTTGGCTACAATTTCACAAGAAGGACATGGAGACATGATTCTTGGACTGTCACACATTTTATTGAAATGCCTGGACATTGAGCAGTGCATAATTTTCATGCCCAGAATAGATTTATGGGCCATTGAGGAGACTGCACGCCCAAATACCAGCAAAGGACAGCTAAATCCTGAAAGAAAGATTTCTATGTCTGAAGGGGTTACTTCCTTGAGAAAAGGTACCTCTGAAATGTGGAATTTATTTGTTGAGCTGCTAGATTCTGCTGTTACTGCTGCATCATTAACTATTATGGCTACTTGTGAAGTGGAGAAGTCCGAGCTTTCACCCGGCATATTAAGTTTTTTTTCACAAAATGTCTGCGGTCATACTGGTTCCATCCCAACAGAATGCACAATACCAAGATTTTTTTTCCATATTGGTGCAAAACTTGATCTTGATCTGGTAATAACATCGGCTGCGGAAAAACTATCATATGATATGATCCAGCTTTATATCAAACTGGTGCACGAGAAAACTCACGAGAGACTTTCTGGGGATAAATCTACGCATAAATGCCCACTTGCAGATACTATTCCGGAAGCTTATAATAAGCAAAGCTCTACTCAAGAAGCAAGTGCTAGGAAGGCCAACATGGCTTCGAATAACAATAAATCTTTGCAGGAATCATTTCCGAAAGCTGGCAGAGTTTTGAAGGGAAACTTGTGTTCAGCAATTTCTGCATTCGGACATCAGATTCTCAGATGCCCTCAATTTGCCGAGCTCGTCTGGGTGACTTCAAAACTGAAAGAGGGTCCTTCCACTGATGCAAGTGGGCCATGGAAGCGTTGGCTTTTTAATACTTGTGTCATGCATACAGATGATGGTTCCCCCAGCAAGAGGATTTCTGGAACCAACCCTTGTAATGCCAGTAGTAATTATGATACGGAGCCTCCTGGTGTTGTGAGGGGGCTAATTGCTGTAGGTTTATTGGCATACAGAGGCTTTTATACATCCATATGGGAAATATCTTCTGATGTTAGGAAGGTGCTTGAGCTCTTGGTTGGACAGATTCGTGAAAAAATGTTTGGCAGAAAGGGACAATACCGCTATTTCGAAGTCTTGTCTCAGGTTGCTTATCTGGATGACATGGTGAACAGCTGGGTATACATGCTCCAGAGCTTAGAAGCAGATAGTAACATAGCAGAGGTGAACTCCAAACCAACGGTTGAGAGGCTGCAGGAAGATGAATGTTTGAAAACTGCAAAAATTGTGAAAAGCTGCATCGCTACATCGGATATTTATTTGGAAGGATTTGCTGATAGTCCTAACAGCAATGGTGAATTTTCTGATCCCTGTCGCAAAGAACTCGTTGATTACATTATGCTCAGCAATAAATCAACTGATGACAGCAATTCCAACTGCCGGTACAAGTGCTGCCCGGGCTGTGTTATTGCTGTAAGAGCGATGGCTCACCAAATAATCTCAGACGATCTGAAGAAATCGAATGAATGCTGCACCGCGGACGATGCCCACGACATAGTGACTTCGTGCTCTATGCGTGTTTTGGATTCATTCAGGAAGTATTTCTTCTGCTCTGCCAATTCGGGGGACGGTGATTGTTATTATGGTAATAAGAGAACTGTGTGTGGCTGCGAATCTACGGGGCTTTTGCCGGAGGAGTGCGGCTGCCACACCAGCATCTCTTTGTCGTCGAAAGAAGAATCTGATAAATTAACTTATTTTTTCCGGGACGGCGTGCTTTCGCAATTGGCCCAGCCTAAAGGGGAGGATTCTGAGCTCCATTGTAAATTTGAAAGCCTATGCATGTGTTTGCTTCACTCTAATGATGTTTATTGTTAATAATCAAAGAAATTTTTTAGAGCTCCATGATCTATTCTTGAAATATAAGAAATGGTGCTAAGGAA

Network for GWHGAAEX000674

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13771.5	zf-HC5HC2H	406	485	4.40E-10
PF00004.28	AAA	610	745	4.60E-38

Protein Sequence

>GWHPAAEX000674
MTYSLRSESTPPAPAKRCRELHYRSKARKKHKRLDAIHDEPSASYIAHRNVADDDIAILRRSSRVRRPPDLLDSSPVPFVRRKRFNDLDSPCGSSELKRETSTGKEKEEPAFQAASSLGEDGDWMSRLRTRAGNGREKLLSSLRELNAGLNEAKTLLPVMGEKNVGMVTSFRSSRRWKKISPQAGNKDDMLPLVDKDYAIDQLAERIYQEGVVNVPVNVQIASEEAGMLENADKVTGFTEEAECVKKCIHDGRTQYIFAVGETFSLQSQGTEEHGSKDHDSSQSDKHPESIDAVERDDALKDNIQETEHTLKDDGVLASVPVEKVASLRVKEGRRCGLCGCGTDGKPPKKLVNESFDSENEAYDGSTASDEPNYNVWDGFGDEPGWLGRLLGPLLDRFGIARVWVHQHCAVWSPEVYFADLGCLKNVRAALCRGRALKCSRCGRPGATIGCRVDRCPKTYHLPCSRIEGCIFDHHKFLIACSDHRRFFQPHGHKHALQIRKMKTKKSRLDLRKVSNEARRKDLEAEEKWLENCGEDEEFLRREGRRLHRDILRIAPIYIGGSSENENMYQGWESVAGLEHVIQCMKEVVLLPLLYPEFFINLGLIPPRGILLHGNPGTGKTHVVRALIGACSRGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKSQPSIIFFDEIDGLAPCRSKQQDQTHSSVVSTLLSLLDGLKSRGSVIVIGATNRPDAVDPALRRPGRFDREIYFPLPTEMDRSSILSLHTRSWPKPLSGSLLSWIANQTVGFAGADLQALCAQAAMYALKRNCALQKLLSYAAKGTIQGKLPNLPSFHVEERDWLAALTLVPPPCSRREAGIAVNDIVASPLPVDLVSCLLLPLTKFLVSLYIDEQVWLSPMLFMASKSVKNVVVSALEQKGVPVTFWWSHIDALIQEPLFAEKIKNKLVQYGLVYCPSGFNYLMSLDEVDDESSENETTDSFGMRTCGAFMHRKLMQKSLLQAGKSRGFRIIISGAPRCGQQHLASCLLQGFMGHKEILKVSLATISQEGHGDMILGLSHILLKCLDIEQCIIFMPRIDLWAIEETARPNTSKGQLNPERKISMSEGVTSLRKGTSEMWNLFVELLDSAVTAASLTIMATCEVEKSELSPGILSFFSQNVCGHTGSIPTECTIPRFFFHIGAKLDLDLVITSAAEKLSYDMIQLYIKLVHEKTHERLSGDKSTHKCPLADTIPEAYNKQSSTQEASARKANMASNNNKSLQESFPKAGRVLKGNLCSAISAFGHQILRCPQFAELVWVTSKLKEGPSTDASGPWKRWLFNTCVMHTDDGSPSKRISGTNPCNASSNYDTEPPGVVRGLIAVGLLAYRGFYTSIWEISSDVRKVLELLVGQIREKMFGRKGQYRYFEVLSQVAYLDDMVNSWVYMLQSLEADSNIAEVNSKPTVERLQEDECLKTAKIVKSCIATSDIYLEGFADSPNSNGEFSDPCRKELVDYIMLSNKSTDDSNSNCRYKCCPGCVIAVRAMAHQIISDDLKKSNECCTADDAHDIVTSCSMRVLDSFRKYFFCSANSGDGDCYYGNKRTVCGCESTGLLPEECGCHTSISLSSKEESDKLTYFFRDGVLSQLAQPKGEDSELHCKFESLCMCLLHSNDVYC

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.890
SRP064423	SRR2545915	Juvenile tuber	13.310
SRP108465	SRR5643513	five period of Gastrodia elata	9.390
	SRR5643514	five period of Gastrodia elata	9.220
	SRR5643515	five period of Gastrodia elata	6.570
	SRR5643524	five period of Gastrodia elata	7.660
	SRR5643525	five period of Gastrodia elata	6.370
	SRR5643528	five period of Gastrodia elata	4.830
	SRR5643658	five period of Gastrodia elata	6.470
	SRR5643659	five period of Gastrodia elata	7.320
	SRR5643660	five period of Gastrodia elata	7.930
	SRR5643661	five period of Gastrodia elata	7.890
	SRR5643662	five period of Gastrodia elata	7.270
	SRR5643663	five period of Gastrodia elata	7.890
	SRR5643664	five period of Gastrodia elata	6.970
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.450
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.080
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.350
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.170
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.810
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.380
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.520
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.240
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.110
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.170
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.220
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.220
SRP279888	Gastro	Gastrodia elata tuber	8.69
	Juven	Juvenile tuber	16.00
	Mother_Gastro	Mother tuber of Gastrodia elata	8.03
	Mother_Juven	Mother tuber of Juvenile	9.48