Detail information of GWHGAAEX000679/evm.TU.scaffold_10.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|573913642|ref|XP_006644501.1|1.36E-116PREDICTED: NAC domain-containing protein 8-like [Oryza brachyantha]
Swissprottr|Q6NQK2|NAC8_ARATH4.00E-60NAC domain-containing protein 8
trEMBLtr|I1NQJ3|I1NQJ3_ORYGL1.00E-117Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA01G0213300.1}
TAIRAT4G285002.00E-102NAC domain containing protein 73

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000624111412425326+
Transcript Sequence

Network for GWHGAAEX000679

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM521924.60E-23
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.060
SRR2545915Juvenile tuber7.510
SRP108465SRR5643513five period of Gastrodia elata6.250
SRR5643514five period of Gastrodia elata2.060
SRR5643515five period of Gastrodia elata1.630
SRR5643524five period of Gastrodia elata2.290
SRR5643525five period of Gastrodia elata202.690
SRR5643528five period of Gastrodia elata157.440
SRR5643658five period of Gastrodia elata359.520
SRR5643659five period of Gastrodia elata0.600
SRR5643660five period of Gastrodia elata0.400
SRR5643661five period of Gastrodia elata0.510
SRR5643662five period of Gastrodia elata0.500
SRR5643663five period of Gastrodia elata0.270
SRR5643664five period of Gastrodia elata0.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.690
SRR6049655Rhizomagastrodiae_C368-T10_good_19.120
SRR6049656Rhizomagastrodiae_C368-T07_good_110.380
SRR6049657Rhizomagastrodiae_C368-T07_good_19.450
SRR6049658Rhizomagastrodiae_C368-T04_good_111.120
SRR6049659Rhizomagastrodiae_C368-T04_good_110.610
SRR6049660Rhizomagastrodiae_C368-T01_good_17.250
SRR6049661Rhizomagastrodiae_C368-T04_good_115.360
SRR6049662Rhizomagastrodiae_C368-T01_good_14.250
SRR6049663Rhizomagastrodiae_C368-T01_good_14.310
SRR6049664Rhizomagastrodiae_C368-T10_good_15.460
SRR6049665Rhizomagastrodiae_C368-T10_good_15.460
SRP279888GastroGastrodia elata tuber 1.71
JuvenJuvenile tuber1.64
Mother_GastroMother tuber of Gastrodia elata 12.94
Mother_JuvenMother tuber of Juvenile 8.37