Detail information of GWHGAAEX000691/evm.TU.scaffold_10.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428223996|ref|YP_007108093.1|5.00E-71extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
nrgi|672166068|ref|XP_008802953.1|0PREDICTED: uncharacterized protein LOC103716646 isoform X3 [Phoenix dactylifera]
trEMBLtr|M0T373|M0T373_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P01250_001}
TAIRAT1G314101.00E-159putrescine-binding periplasmic protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000632584143276961+
Transcript Sequence

Network for GWHGAAEX000691

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13343.5SBP_bac_62194255.20E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0015846Biological Processpolyamine transport
GO:0019808Molecular Functionpolyamine binding
GO:0042597Cellular Componentperiplasmic space

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.120
SRR2545915Juvenile tuber22.320
SRP108465SRR5643513five period of Gastrodia elata9.300
SRR5643514five period of Gastrodia elata8.460
SRR5643515five period of Gastrodia elata10.810
SRR5643524five period of Gastrodia elata7.750
SRR5643525five period of Gastrodia elata10.650
SRR5643528five period of Gastrodia elata11.020
SRR5643658five period of Gastrodia elata11.080
SRR5643659five period of Gastrodia elata30.440
SRR5643660five period of Gastrodia elata37.570
SRR5643661five period of Gastrodia elata31.550
SRR5643662five period of Gastrodia elata45.350
SRR5643663five period of Gastrodia elata40.190
SRR5643664five period of Gastrodia elata53.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.380
SRR6049655Rhizomagastrodiae_C368-T10_good_18.910
SRR6049656Rhizomagastrodiae_C368-T07_good_116.070
SRR6049657Rhizomagastrodiae_C368-T07_good_116.880
SRR6049658Rhizomagastrodiae_C368-T04_good_113.580
SRR6049659Rhizomagastrodiae_C368-T04_good_112.710
SRR6049660Rhizomagastrodiae_C368-T01_good_113.840
SRR6049661Rhizomagastrodiae_C368-T04_good_113.650
SRR6049662Rhizomagastrodiae_C368-T01_good_19.830
SRR6049663Rhizomagastrodiae_C368-T01_good_110.950
SRR6049664Rhizomagastrodiae_C368-T10_good_17.740
SRR6049665Rhizomagastrodiae_C368-T10_good_17.740
SRP279888GastroGastrodia elata tuber 51.59
JuvenJuvenile tuber15.01
Mother_GastroMother tuber of Gastrodia elata 14.51
Mother_JuvenMother tuber of Juvenile 12.09