Gene detail

Detail information of GWHGAAEX000701/CADD00070.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000006	4129959	4131514	+

Transcript Sequence
>GWHTAAEX000701 GTGTGTATAATATCCCACCATAAAAGGTGCTTCATTTTCAATCAGGCTTGGTGCTTCATTTTAAATCTAGCTTGCCAAAATTAAATTTTGTAATTTTTATTTTTAAAAGAAGTTTAAAAGATAATAGCTTGCCTATTTTAATTCCTTTTACTTTTGCTTTATTATCTTAAAAAGAGAATATGAAATAAGAAATAGTATTTCATAATATTCTATATTTTTATATTTATTTATATTTATTCAAAGATCTCTTTTTTGAATTAATTGATTTAGAGTCATGCATTTGAAGAGACAATTATAGAGAATTTTCTTAGCTTTTCATTAGCTATGAGAACCTTTAAATCTAATCATTGATTTAAGAACTATGACAACAATATGCGAGCTATGCAAAAGAAAGATTGAAAATAAGTTTATCATAGTAACTTCATGAATTCACCACGACATAATCAAAAAGCACTCTTAGCTTTACAACATGCATAAAATCATAAATGATGAAGATACGATAACAAGGACATAGGCTGAGTAAATCACAAGTTGAAGATGTACGACGATTGTGAGTGTGGACAGTGTTGGTATGACAAAAGTCTTTGACACTATAATGGCATACATACTAACTCTCCCAAGTTGGGAAGAACTCAGATCTGATGATTAAAGCTTAAATTTTTTCCATATTGTTTGAGTATTTTTTATTTATCTTTTGATTTTCTTCCTTGCTTGTTAGTTTTTTTTTCTGGTTGATTTTCCATCTTATATAAGGGATGATACCTCAGATAGCTGTGACTTCTGGTTATTATTGTTTGGCCATCCAGAAATTGGTTAAGTTGTTTACTCTCCTCAATTGGGTTGGTGGATGCTCAAGAATTAAGTCTCTCAAATGCTGGAGGGTTTAATTGCTTATATAACTACTAGTTTTTGGAAGGAACTAAAAGAGATTAAAAATGTTGTTAGTACCATTGCACAGTAGGTAGATTGACTCCAATGCATTTGTCACAATCCTCTTAAATATTTGAAAGGGACCAACAGCTCTTGCAGGCCATTTGTGAATAATTCCAAATGGAAATTGCTTAAGCTTAACACAAATCATGACATTACCTCTTTAAAAAAAACTTAGTTTTTTTTAATGCATCAGATAATCTCTTAAAATTTTGATTACTTAAATTTGCTCATTGGTGGCACGTGGAAGGTGGAAGCGAGATCTGCTGTTCGGAGCGCGGTCGGTATCAGCTTGGAAGAGGATGATGATGAAGATGACAACGATATAACTTGAAGTTGATCTTCACGAACAATCCTTTGTCGTTCAAGCACCTTCCTTTCCTTTCTTGGGAGTCCTCTAAGGGTCGTACAAAGGATCCTTTATTTGAGTGGAAGGGAGCACAAAAAGAAGAGGAGGTTACTCATTATATACTACATCTCATCATGGAATAATACATGGAATGAGGCATGTCTTTATTTATAGCCTAAAAGAGGCATGTCAAATTACCTTCAGACGCTTAATAAGCATACCGCTCTTTACTCTTAACAATGCTATTTTTCATAAGTAACCTCTTCTTTTTGTGCAT

Network for GWHGAAEX000701

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.200
SRP064423	SRR2545915	Juvenile tuber	1.200
SRP108465	SRR5643513	five period of Gastrodia elata	3.680
	SRR5643514	five period of Gastrodia elata	4.200
	SRR5643515	five period of Gastrodia elata	3.520
	SRR5643524	five period of Gastrodia elata	3.880
	SRR5643525	five period of Gastrodia elata	2.890
	SRR5643528	five period of Gastrodia elata	2.230
	SRR5643658	five period of Gastrodia elata	2.710
	SRR5643659	five period of Gastrodia elata	4.080
	SRR5643660	five period of Gastrodia elata	4.350
	SRR5643661	five period of Gastrodia elata	3.290
	SRR5643662	five period of Gastrodia elata	4.440
	SRR5643663	five period of Gastrodia elata	5.150
	SRR5643664	five period of Gastrodia elata	3.690
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.170
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.260
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.160
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.850
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.660
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.360
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.490
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.010
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.670
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.980
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.980
SRP279888	Gastro	Gastrodia elata tuber	5.30
	Juven	Juvenile tuber	5.62
	Mother_Gastro	Mother tuber of Gastrodia elata	4.59
	Mother_Juven	Mother tuber of Juvenile	3.22