Detail information of GWHGAAEX000724/evm.TU.scaffold_10.118


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|20808085|ref|NP_623256.1|9.00E-113GTP-dependent nucleic acid-binding protein EngD [Thermoanaerobacter tengcongensis MB4]
KOGKOG14910Predicted GTP-binding protein (ODN superfamily)
nrgi|593693912|ref|XP_007147477.1|0hypothetical protein PHAVU_006G127800g [Phaseolus vulgaris]
Swissprottr|Q851Q6|OBGC2_ORYSJ6.00E-14Probable GTP-binding protein OBGC2
trEMBLtr|V7BSC2|V7BSC2_PHAVU0Obg-like ATPase 1 {ECO:0000256|HAMAP-Rule:MF_03167}
TAIRAT1G305800GTP binding

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000666766266750630+
Transcript Sequence

Network for GWHGAAEX000724

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01926.22MMR_HSR1271401.40E-21
PF06071.12YchF-GTPase_C3053882.10E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.760
SRR2545915Juvenile tuber55.280
SRP108465SRR5643513five period of Gastrodia elata87.190
SRR5643514five period of Gastrodia elata114.060
SRR5643515five period of Gastrodia elata86.830
SRR5643524five period of Gastrodia elata114.180
SRR5643525five period of Gastrodia elata51.870
SRR5643528five period of Gastrodia elata66.920
SRR5643658five period of Gastrodia elata49.340
SRR5643659five period of Gastrodia elata63.610
SRR5643660five period of Gastrodia elata64.400
SRR5643661five period of Gastrodia elata63.110
SRR5643662five period of Gastrodia elata61.530
SRR5643663five period of Gastrodia elata61.710
SRR5643664five period of Gastrodia elata57.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1108.450
SRR6049655Rhizomagastrodiae_C368-T10_good_198.020
SRR6049656Rhizomagastrodiae_C368-T07_good_1113.400
SRR6049657Rhizomagastrodiae_C368-T07_good_199.030
SRR6049658Rhizomagastrodiae_C368-T04_good_194.810
SRR6049659Rhizomagastrodiae_C368-T04_good_193.840
SRR6049660Rhizomagastrodiae_C368-T01_good_188.290
SRR6049661Rhizomagastrodiae_C368-T04_good_192.720
SRR6049662Rhizomagastrodiae_C368-T01_good_1102.930
SRR6049663Rhizomagastrodiae_C368-T01_good_193.660
SRR6049664Rhizomagastrodiae_C368-T10_good_1120.750
SRR6049665Rhizomagastrodiae_C368-T10_good_1120.750
SRP279888GastroGastrodia elata tuber 107.45
JuvenJuvenile tuber73.15
Mother_GastroMother tuber of Gastrodia elata 52.86
Mother_JuvenMother tuber of Juvenile 51.01