Detail information of GWHGAAEX000729/evm.TU.scaffold_10.133
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|116622694|ref|YP_824850.1| | 3.00E-26 | serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076] |
| KOG | KOG0581 | 6.00E-110 | Mitogen-activated protein kinase kinase (MAP2K) |
| nr | gi|672114169|ref|XP_008775718.1| | 1.87E-151 | PREDICTED: mitogen-activated protein kinase kinase 9-like [Phoenix dactylifera] |
| Swissprot | tr|Q9FX43|M2K9_ARATH | 2.00E-110 | Mitogen-activated protein kinase kinase 9 |
| trEMBL | tr|A0A075EYS9|A0A075EYS9_TOBAC | 5.00E-131 | MAPKK {ECO:0000313|EMBL:AIE54284.1} |
| TAIR | AT1G73500 | 6.00E-110 | MAP kinase kinase 9 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000006 | 7367553 | 7369155 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000729
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 60 | 321 | 3.30E-59 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | STE_STE7 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K20604 | MKK9 | MAPK signaling pathway - plant | map04016 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 73.430 |
| SRR2545915 | Juvenile tuber | 64.020 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 60.200 |
| SRR5643514 | five period of Gastrodia elata | 56.250 | |
| SRR5643515 | five period of Gastrodia elata | 125.100 | |
| SRR5643524 | five period of Gastrodia elata | 65.540 | |
| SRR5643525 | five period of Gastrodia elata | 145.270 | |
| SRR5643528 | five period of Gastrodia elata | 156.700 | |
| SRR5643658 | five period of Gastrodia elata | 80.030 | |
| SRR5643659 | five period of Gastrodia elata | 219.850 | |
| SRR5643660 | five period of Gastrodia elata | 155.950 | |
| SRR5643661 | five period of Gastrodia elata | 161.190 | |
| SRR5643662 | five period of Gastrodia elata | 121.680 | |
| SRR5643663 | five period of Gastrodia elata | 107.040 | |
| SRR5643664 | five period of Gastrodia elata | 108.050 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 68.300 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 104.570 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 66.530 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 73.650 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 64.650 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 70.210 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 44.020 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 46.840 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 32.340 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 29.560 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 52.870 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 52.870 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 38.19 |
| Juven | Juvenile tuber | 15.21 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 76.12 | |
| Mother_Juven | Mother tuber of Juvenile | 36.25 |