Detail information of GWHGAAEX000732/evm.TU.scaffold_10.138


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|224371821|ref|YP_002605985.1|4.00E-54SerA2 [Desulfobacterium autotrophicum HRM2]
KOGKOG00693.00E-153Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily)
nrgi|743762819|ref|XP_010910119.1|5.66E-175PREDICTED: glyoxylate reductase/hydroxypyruvate reductase isoform X2 [Elaeis guineensis]
Swissprottr|O49485|SERA1_ARATH8.00E-23D-3-phosphoglycerate dehydrogenase 1, chloroplastic (Precursor)
trEMBLtr|M0SGQ7|M0SGQ7_MUSAM1.00E-168Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P21910_001}
TAIRAT1G721903.00E-153D-isomer specific 2-hydroxyacid dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000676942547731797+
Transcript Sequence

Network for GWHGAAEX000732

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00389.292-Hacid_dh433305.50E-13
PF02826.182-Hacid_dh_C1193069.90E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0051287Molecular FunctionNAD binding
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.980
SRR2545915Juvenile tuber18.630
SRP108465SRR5643513five period of Gastrodia elata12.930
SRR5643514five period of Gastrodia elata12.730
SRR5643515five period of Gastrodia elata12.730
SRR5643524five period of Gastrodia elata12.660
SRR5643525five period of Gastrodia elata14.890
SRR5643528five period of Gastrodia elata18.450
SRR5643658five period of Gastrodia elata16.950
SRR5643659five period of Gastrodia elata9.980
SRR5643660five period of Gastrodia elata9.310
SRR5643661five period of Gastrodia elata9.680
SRR5643662five period of Gastrodia elata9.040
SRR5643663five period of Gastrodia elata12.060
SRR5643664five period of Gastrodia elata10.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.980
SRR6049655Rhizomagastrodiae_C368-T10_good_117.180
SRR6049656Rhizomagastrodiae_C368-T07_good_113.870
SRR6049657Rhizomagastrodiae_C368-T07_good_114.250
SRR6049658Rhizomagastrodiae_C368-T04_good_117.050
SRR6049659Rhizomagastrodiae_C368-T04_good_118.150
SRR6049660Rhizomagastrodiae_C368-T01_good_115.000
SRR6049661Rhizomagastrodiae_C368-T04_good_115.160
SRR6049662Rhizomagastrodiae_C368-T01_good_112.010
SRR6049663Rhizomagastrodiae_C368-T01_good_111.940
SRR6049664Rhizomagastrodiae_C368-T10_good_113.310
SRR6049665Rhizomagastrodiae_C368-T10_good_113.310
SRP279888GastroGastrodia elata tuber 10.94
JuvenJuvenile tuber15.15
Mother_GastroMother tuber of Gastrodia elata 17.49
Mother_JuvenMother tuber of Juvenile 22.83