Detail information of GWHGAAEX000748/evm.TU.scaffold_10.161
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|427739450|ref|YP_007058994.1| | 4.00E-59 | sucrose-6F-phosphate phosphohydrolase [Rivularia sp. PCC 7116] |
| nr | gi|743775075|ref|XP_010917912.1| | 0 | PREDICTED: sucrose-phosphatase 2-like isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q5IH13|SPP2_TOBAC | 0 | Sucrose-phosphatase 2 |
| trEMBL | tr|A5BUI1|A5BUI1_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN77297.1} |
| TAIR | AT1G51420 | 7.00E-180 | sucrose-phosphatase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000006 | 9078391 | 9094396 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000748
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05116.12 | S6PP | 9 | 261 | 1.20E-100 |
| PF08472.9 | S6PP_C | 262 | 394 | 2.10E-52 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K07024 | SPP | Biosynthesis of secondary metabolites | map01110 |
| Starch and sucrose metabolism | map00500 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005986 | Biological Process | sucrose biosynthetic process |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0050307 | Molecular Function | sucrose-phosphate phosphatase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 70.800 |
| SRR2545915 | Juvenile tuber | 86.120 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 126.260 |
| SRR5643514 | five period of Gastrodia elata | 237.110 | |
| SRR5643515 | five period of Gastrodia elata | 164.860 | |
| SRR5643524 | five period of Gastrodia elata | 256.570 | |
| SRR5643525 | five period of Gastrodia elata | 113.100 | |
| SRR5643528 | five period of Gastrodia elata | 127.580 | |
| SRR5643658 | five period of Gastrodia elata | 121.930 | |
| SRR5643659 | five period of Gastrodia elata | 97.170 | |
| SRR5643660 | five period of Gastrodia elata | 88.680 | |
| SRR5643661 | five period of Gastrodia elata | 95.070 | |
| SRR5643662 | five period of Gastrodia elata | 80.250 | |
| SRR5643663 | five period of Gastrodia elata | 93.700 | |
| SRR5643664 | five period of Gastrodia elata | 79.200 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 126.850 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 141.910 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 149.240 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 89.220 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 104.860 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 90.280 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 88.890 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 101.160 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 205.290 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 156.810 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 225.130 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 225.130 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 104.13 |
| Juven | Juvenile tuber | 133.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 119.08 | |
| Mother_Juven | Mother tuber of Juvenile | 164.47 |