Detail information of GWHGAAEX000755/evm.TU.scaffold_10.180


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743838901|ref|XP_010936843.1|5.09E-96PREDICTED: protein Barley B recombinant [Elaeis guineensis]
Swissprottr|Q8GUC3|BBR_HORVU2.00E-71Protein Barley B recombinant
trEMBLtr|A0A022QNC4|A0A022QNC4_ERYGU8.00E-86Uncharacterized protein {ECO:0000313|EMBL:EYU30217.1}
TAIRAT2G019306.00E-70basic pentacysteine1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000061033334910344257+
Transcript Sequence

Network for GWHGAAEX000755

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06217.11GAGA_bind13013.20E-90
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyBBR-BPC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.520
SRR2545915Juvenile tuber21.800
SRP108465SRR5643513five period of Gastrodia elata15.400
SRR5643514five period of Gastrodia elata14.400
SRR5643515five period of Gastrodia elata14.650
SRR5643524five period of Gastrodia elata14.600
SRR5643525five period of Gastrodia elata10.210
SRR5643528five period of Gastrodia elata9.240
SRR5643658five period of Gastrodia elata13.580
SRR5643659five period of Gastrodia elata19.020
SRR5643660five period of Gastrodia elata18.270
SRR5643661five period of Gastrodia elata17.870
SRR5643662five period of Gastrodia elata19.690
SRR5643663five period of Gastrodia elata17.430
SRR5643664five period of Gastrodia elata19.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.490
SRR6049655Rhizomagastrodiae_C368-T10_good_117.010
SRR6049656Rhizomagastrodiae_C368-T07_good_113.610
SRR6049657Rhizomagastrodiae_C368-T07_good_116.750
SRR6049658Rhizomagastrodiae_C368-T04_good_115.530
SRR6049659Rhizomagastrodiae_C368-T04_good_115.810
SRR6049660Rhizomagastrodiae_C368-T01_good_113.950
SRR6049661Rhizomagastrodiae_C368-T04_good_117.450
SRR6049662Rhizomagastrodiae_C368-T01_good_113.690
SRR6049663Rhizomagastrodiae_C368-T01_good_113.100
SRR6049664Rhizomagastrodiae_C368-T10_good_113.700
SRR6049665Rhizomagastrodiae_C368-T10_good_113.700
SRP279888GastroGastrodia elata tuber 24.08
JuvenJuvenile tuber20.75
Mother_GastroMother tuber of Gastrodia elata 17.06
Mother_JuvenMother tuber of Juvenile 13.32