Gene detail

Detail information of GWHGAAEX000757/evm.TU.scaffold_10.183_evm.TU.scaffold_10.185

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0701	4.00E-102	dsRNA-specific nuclease Dicer and related ribonucleases
nr	gi\|695055229\|ref\|XP_009415783.1\|	0	PREDICTED: putative metallophosphoesterase At3g03305 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q0WVZ1\|Y3330_ARATH	5.00E-107	Putative metallophosphoesterase At3g03305 (Precursor)
trEMBL	tr\|M0TWA7\|M0TWA7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P00500_001}
TAIR	AT3G03300	4.00E-102	dicer-like 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000006	10413568	10464251	+

Transcript Sequence
>GWHTAAEX000757 CGATCAGATTCCCCACTTACCCCCTCGCGGGAATAAAATCCCACTCTCGCAGGCACCAGTCCTCACCAACATTGCTCCACCAAATTCCAAATCTCCACCGGCCGAATCGAAACACCGAATAATCAATCTCTCGCGATTGCAAATGGCATCGCCGGCGGCTTTCCTCTTCCTCTCATTCTACCTTTCATCGCCTCCATTAGTCTTCTATGCCGATAAGACGGCTGCTGCGGCGGATCTAGTGTCGAGGGAGTTCTTCTCGATGGAAGGGGACGTGGCTTGGATCGTCCAGGTCTCCGATCTCCATCTCAGCGCTCACCATCCCGAACGAGCGGGAGACCTCGCTGAGCTCCTCGGCCCGGCGATGCAGGCTATCAGGCCCGATCTGCTTCTCGTCACCGGTGACATTACGGATGCAAAAAACAGAAAAAAAACTAGCACAAGGCAGGATGAATCAGAGTGGATTCAATACAGAAACTCAATGGGTACTCTTGCAGAGGAAAGTGGCTTTGAAAAGAGAAGAATATTTGATTTACGTGGGAATCATGACAAATATGGAGTGCCTTATGTGGGAAGTGCACTTGATTTCTTCTCCATTTATAGTATCAGCTCACAGTTCAATAGGCTCAGCACACTTCAAAGTATATCCCTTGAGGGCGAGGACGATCGAAGGTACAAATTTGTCGCCATAGACGACACAATGAAAATCGGAATTCGCGGGCCTTCTAACTTTTTCGGCCATCCGACCCTCGAAAGGATTCGCGCCGTCGAAGAGGAGCTCCGTCATCCCCCCTCCGTCGCTAAAATCGTCTTCGGCCATTTCCCGATGTCCTTCACAGCTTCCGCTGAAAACGGAGAGAGGTACGAGTCCGTCTTTGCGAGCCAATCCGTCGCCTCATACCTCTGCGGCCACCTTCATTCCACGCTCGGCAAGCGGCTATGGAGGCTGCACTCGGATCAATTTTGGGAATGGGAACTCGGGGACTGGAAGGACTTTAGGGTCATCAGGATTCTATCCATCGATGGAGGGGCCGTGTCTTTTCTCGATACCGAACTTCGATCGAGGGATTTCCAGACTTCCATTCTAATCACCCACCCTGTAGACTCCAGAAGCATGAGCAACCCCCTTCGCATTCTCACAAGAAACGATATCAACGCTTTGGTCTTCTCGACCCAACCCATCCTCAATGTAACGGCCAAGGTTCTCGACTCCTGGAGAGACTTCAGGATAGTGGAGGAGATGCCTCTGCAGTTCGCTTCCATTTCTTCCAATCCTACGAAGCCTCTCTACCGCGCGAAATGGAACGCTGAGAGCTACACGAGCGCATCTGCTTCCCGGTACTGGCTGCAGGTCCTCGCCATAGATCGCGAGGGCAGGAAGACGAAGAGCGATGCGAGGCCGTTCTCCGTCCAAGGAAAGGCTGCGGGGTTCTCGCCTTCGCTGCTGGCTTTTCTGCTGCTTTATCTGCCATGGGAAGAGGTTTACCGAGCGCTCGTATGGGCCAACATCTCCTTTCTTACCTTTCTCCTCTGCCTTCCAAGATGCTGCTCTCGTCCAAGAAACATTCTGTGGTTTGCCACGGCCGTCTACCTCGTTTGTTTGCTCACAATGCCCTGGTTTTGGGGTCACGCGGTTTCGGAGAATGGGCAGCTCTTTCGTTTAGGCTTGTCCGGCTGGGGAACAGAAAGGCTGGGAGTTCCCGACGTGATGATGATCACTCTTCCCTTCTTGTATCTTGTCGTCGCGCCATTGTACCTTCTGATCTTGGCTTCGGGATGCAGAATTCGCTCTGGTTGGCTGAGAAAGGCTCTTTTGTTTGCAGCTTGCTTTTTACATCATGGAAGCTTATGGAGCTGCGCCTGTGGCATTGTCGCCTGCGGTTTCGTGGGTGCCGTTATTGCTGCTTGCGGCTGCCGTCTGTTCGACTGCGAAGATGGGAAGATGATGTTGCTTTTAAACCTGAAGAGGTTGACTTTTTAAAGAAATAAGCAAGTTGCATATGTGGCTTAGTGTTTTTTGTGATACGCATTAGCAATTGCTTCTGTGCACTGTTGGCACTTTCCGCCAAAATAGTGGTGCTGTAATTTAATTGAATAATGTATAAAACAGTATTGTGTTTAGTGATAAAAGAATACAATTTTGCAGCTCCGAAAGAGCTGAATATAAAGACATAAATATACTTAATGTGTACATTTAC

Network for GWHGAAEX000757

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00149.27	Metallophos	46	258	9.20E-14

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.590
SRP064423	SRR2545915	Juvenile tuber	1.320
SRP108465	SRR5643513	five period of Gastrodia elata	2.310
	SRR5643514	five period of Gastrodia elata	1.960
	SRR5643515	five period of Gastrodia elata	1.320
	SRR5643524	five period of Gastrodia elata	1.270
	SRR5643525	five period of Gastrodia elata	10.290
	SRR5643528	five period of Gastrodia elata	7.340
	SRR5643658	five period of Gastrodia elata	6.470
	SRR5643659	five period of Gastrodia elata	0.990
	SRR5643660	five period of Gastrodia elata	1.260
	SRR5643661	five period of Gastrodia elata	5.540
	SRR5643662	five period of Gastrodia elata	1.550
	SRR5643663	five period of Gastrodia elata	1.020
	SRR5643664	five period of Gastrodia elata	1.610
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.450
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.600
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.790
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.640
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.320
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.050
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.570
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.980
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.430
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.150
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.150
SRP279888	Gastro	Gastrodia elata tuber	4.21
	Juven	Juvenile tuber	1.54
	Mother_Gastro	Mother tuber of Gastrodia elata	2.44
	Mother_Juven	Mother tuber of Juvenile	1.29