Detail information of GWHGAAEX000764/evm.TU.scaffold_100.8
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|470182681|ref|YP_007568556.1| | 9.00E-09 | Pyruvate decarboxylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
| KOG | KOG1184 | 2.00E-18 | Thiamine pyrophosphate-requiring enzyme |
| nr | gi|473817398|gb|EMS46913.1| | 2.26E-18 | Pyruvate decarboxylase isozyme 2 [Triticum urartu] |
| Swissprot | tr|P28516|PDC1_MAIZE | 1.00E-19 | Pyruvate decarboxylase 1 |
| trEMBL | tr|W5DIU7|W5DIU7_WHEAT | 3.00E-20 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_3DS_9C313E1BB.1} |
| TAIR | AT5G01330 | 2.00E-18 | pyruvate decarboxylase-3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000099 | 157312 | 157844 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000764
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01568 | PDC, pdc | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Biosynthesis of antibiotics | map01130 | ||
| Glycolysis / Gluconeogenesis | map00010 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.000 |
| SRR5643514 | five period of Gastrodia elata | 0.000 | |
| SRR5643515 | five period of Gastrodia elata | 0.000 | |
| SRR5643524 | five period of Gastrodia elata | 0.000 | |
| SRR5643525 | five period of Gastrodia elata | 0.490 | |
| SRR5643528 | five period of Gastrodia elata | 0.230 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.410 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.370 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.170 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.220 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.16 |
| Juven | Juvenile tuber | 0.14 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.22 | |
| Mother_Juven | Mother tuber of Juvenile | 0.55 |