Gene detail

Detail information of GWHGAAEX000766/evm.TU.scaffold_100.10

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|297621203\|ref\|YP_003709340.1\|	4.00E-23	serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOG	KOG0698	1.00E-123	Serine/threonine protein phosphatase
nr	gi\|672109972\|ref\|XP_008792913.1\|	5.59E-171	PREDICTED: probable protein phosphatase 2C 32 [Phoenix dactylifera]
Swissprot	tr\|Q8RX37\|P2C02_ARATH	3.00E-124	Probable protein phosphatase 2C 2
trEMBL	tr\|M0SWG3\|M0SWG3_MUSAM	4.00E-148	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P07340_001}
TAIR	AT1G07160	1.00E-123	Protein phosphatase 2C family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000099	266569	269400	-

Transcript Sequence
>GWHTAAEX000766 AACTCCAAAATGATTGCAGTCTTGAACTCACCGGTATTTACACCTCCTAGGATTTCTCTCGTCTGCAAAACCTCCCCGGGATCTCTTGCTCTCGGCTTAACCCAGCAGCATCTCTTGGCGGCAGAGGCGGATGGCGCTCCATCGCCGTCGTCATCCTCTTCGCCCTTCCGAAAGTTAAAGCGAGGGGCCGGCAGCCTTCGATTCTTCAACGAGATCTGCCCTTCTCCGTCCCCGATATTAAACGCGGCACCCAAATCGTTCCCTCGATCTTCTGCTTCTTGCTCATGTTCTTCGCCTGCATCGACTTCGAATTTGCGTGGTTCCGCTTCTTTCTTAAAGAGGAAGAGGCCGGCTCGGTTGGATATTCCGATGTTGGGATTGTTGACTATCGCGCCTCCGTTGGCTTCTGATGGCCGCCGGGAGGTGGAGGAAGAAAGCACGCGCTATTCAGTTTATTGTAAGAGGGGTCGGAAGAGGGTCGAGATGGAAGATCGCCACAGCTCTGCACTTGATCTCTGCGGAGATCCCCAAATGGCATTCTTTGGTGTTTTCGATGGCCATGGCGGATCGCATGCCTCCCAATTCACTTCCGAAAATCTTGGGGATCGTATCTTGGAGAAGGCGATGGAAAGAAGAGAAGAAGGGGATATTAAGATAGAGCAAGCGGTAAGGAATGGGTATCTGAGAACTGATGCTGATTTTCTAAAGGAGAACTTGAGCGGAGGAACTTGCTGCGTCACTGCTTTTATCAGAAATGGTGACCTCATCGTTTCAAATGCTGGAGACTGTCGTGCTGTCTTGAGCCTCTCCGGTGCCGCTAAGGCCCTCACTTCCGACCACCGGCCTTCAAGGGAAGACGAGAAAGACAGGATTGAAAGCCTTGGTGGTTATGTAGATTGTTCCAGAGGAGTATGGAGATTGCAGGGTTCCTTGGCTGTCTCCAGGGGAATCGGTGATTCCCATCTTAAACAATGGGTGATACCGGAACCTGAGACCAGTGTTATCAAGATCGAGCCTGAATGCGAATTTTTAATTTTGGCTTCTGATGGCCTTTGGGAAAAGGTTAGTTGCCAGGAGGCGGTTGATATAGCTCGTCCAATATGTTTGCAATCCCAGATAGCCTCTCCACTATCTGCTTGCAAGAAGCTTGTGAACCTTTCAGTTTCTCGTGGTTCAATGGATGACATCAGTGTTATGATAATTCAGCTGCAGCATTTTATGAAGCGGATTTGGTGATGAGGATTGCTGTTCTTTTCAAGAATTGACAGGGAGTTTCTATCTTTGAGCAGGAAAGTAAAGTTCTTTTATAATTTCTGATTCTGGGAAGAATGATTTTATCCACCTAAAGATGCTTTGATGGAAAATCGTTCGCCAGAGTTTCTGCTTCACAAGCAATCTAGTCGTGTCTGAATTTTTATTTTTGGAGCGTTTGTTCATCATTGGCTGAGAGAATTCAAATTCAGAGGATGATTGGCATTGTTCTTCTCTTCTCTGTGGATTGATTGGCGAACCACGCTTTGCTTGCAGGGAATTGTGAATTGATGGTAGATGATGGTACTAATGGCTATTATGATAATTTGATGAGGTGTTACTTCTCATGAAAGTTTACGTTTCACATACATTTTGTGTTAAAGGAATGTAGATCATTGACTTTGCCTCAACCATCCACTCAATTAGTTTGCCATATATGCATATTTCCTTTATAGGATTATCCCTTGTATATAAATATGAGCTGTTTTGTTTCACAAAAAATGCAATGTATACAAATTATGTTCTCTCAACTGTTCTAACATAATATCACAATGGATTTGATTCTTGGGCTGCAATCCCCCATCTTTTTTTTTTTTTTTTTTATGGATTGAAGATTTCCTCTGCATTTTTCTACACATTCGCTCTCAAGGCCAGCAACTTGTTGCTCCTATGCGCCATTCAAGATCATTGCTTTTACAATTCAGAAGTTTACCTCTATTATGGAATTGACCTGAGTTCTTAACTATTTCTTCAGCTCTGAACCTCTCAACCTGCACCATCGATGAAGCTTTTATGGGATCACACAAATATTATTGTGGATATACTATAGTTCTTTTTAATAGCTCTTCAACTGCTATAAGTGTAGTAAATACAAGAGCCTCAACAATCATCACAATTATTATATACATAATTTTTCTGCGTTTGAAAAATTATTCTACAAGCCTTTGGTTATACTGTTACAATTTCTTAAGCCTGCCAAATTTTAACTTGGTGTTCCCTTCTGTTTCATTTTGGGTTGTGGCTATAATATACAAGCTATCAAAGTTGGGGTCACATTTTGATGCATCATGGATGTTTTAAACGAGAGCGTTGATAACATGAGCATACTCGAGGAATTTGAGTAGTACATGATGACGTTATGCTTTTGTTTGTAGGAGGTTCTCAGGTTATATCAGGTTATGTTATGTTATGTTATGTTAAATGATTTTTTGTTAAACGAAAAATACATGAAATCAAATCTAAAAGATGTTGTTAAAAATTAAACTTGATTTAG

Network for GWHGAAEX000766

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module13

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00481.20	PP2C	151	393	4.20E-60

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0043169	Molecular Function	cation binding
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	60.800
SRP064423	SRR2545915	Juvenile tuber	48.170
SRP108465	SRR5643513	five period of Gastrodia elata	91.630
	SRR5643514	five period of Gastrodia elata	48.940
	SRR5643515	five period of Gastrodia elata	147.720
	SRR5643524	five period of Gastrodia elata	33.570
	SRR5643525	five period of Gastrodia elata	430.350
	SRR5643528	five period of Gastrodia elata	284.860
	SRR5643658	five period of Gastrodia elata	212.260
	SRR5643659	five period of Gastrodia elata	114.400
	SRR5643660	five period of Gastrodia elata	20.540
	SRR5643661	five period of Gastrodia elata	48.370
	SRR5643662	five period of Gastrodia elata	161.310
	SRR5643663	five period of Gastrodia elata	81.120
	SRR5643664	five period of Gastrodia elata	538.660
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	293.960
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	208.220
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	162.120
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	222.270
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	222.430
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	312.920
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	349.120
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	275.150
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	74.140
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	206.060
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	168.820
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	168.820
SRP279888	Gastro	Gastrodia elata tuber	67.16
	Juven	Juvenile tuber	14.40
	Mother_Gastro	Mother tuber of Gastrodia elata	208.54
	Mother_Juven	Mother tuber of Juvenile	69.53