Gene detail

Detail information of GWHGAAEX000767/evm.TU.scaffold_100.11

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743842682\|ref\|XP_010937873.1\|	0	PREDICTED: protein trichome birefringence-like 3 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q8LED3\|TBL3_ARATH	2.00E-163	Protein trichome birefringence-like 3
trEMBL	tr\|M0THU3\|M0THU3_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P15560_001}
TAIR	AT5G01360	5.00E-129	Plant protein of unknown function (DUF828)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000099	276941	284377	-

Transcript Sequence
>GWHTAAEX000767 GTTTTTTTGAATGTCATATCAACGGATCTAAATAATATTTCTGAATTGATTGAATGTATTTGTAGGTGGGCTTCACATTTTTCTCAATTTAATTTTTAAAATAAGACACCATTTTGATTTGAAAAATAGTGAGCTGCAGTTGTGGCAGCAGCAATCTCCAATCAACATGACTTTAACTTTACTCCTACTCAAAAACCCATTGGATAAGCCACACCTGCGGTTTGCCGACTATATAATTACTCTCTTCGATAACCTCATCCTCCATTTTTGGCAAGCTCATAGATCCCCTGTAGCAACTCAATGAAGATTCCCAATGGGAAGCTTCCTCTGTCGGCAATGGCGGCCATTATATGCACCGTAGCATTTGCGGGTTTAATTTTCACAGAGGACCTCCGGGCTTTTAGTGGCACATCAATTCTTAAGCTCAAATCATGTTCAACGAAGGAGCCAGTGCCGAATTCATTTCCAAATCTGAAACAGAAGATTGATCTGCCGCTTGAGGACGATTTGATCGACGAAGATAAGATTCAATTCGAATCTGACCGGGAATGTGGGATTGAGAAAGGAAAATGGGTCTCCAGTGCATCCGCAAAGCCCTTTTATACTGATGAGAGCTGCCCGTATTTGGACAAGCAAGTAGCATGCTCCAGAAATGGAAGGCCTGATACTGACTACTTGTACTGGGAGTGGCAGCTTGACAACTGCATATTGCCGAGTTTTAATGCTGCAGCGCTCCTTGAGAAGCTAAGGGGAAAGAGGCTGATGTTTTCTGGAGATTCACTGCAAAGAGCGCAATGGCAATCTCTTGTATGCATGGTGGAGTCTCAAGTGCCGTCGGATAAGAAGTCAATGGAGCGCAGGCGATCCCTGTCCGTGTTTAAGATTGAGGATTACAATGCGACAATCGAGTTCTACTGGGCACCATACCTGGTTCAATCCAATTCAGACGAGCCAATCATCTGGGACACGAAAAAGAGGATATTACGAGTGGACTCGATCTCCAAGCATGCTCAGCATTGGCTTGGGGTGGACTTCCTAATCTTCAATAGTTATGTTTGGTGGACTAGTGACCCTAGAATGAAGTCTCTGTGGGGATCATTTGCCAATGGAGAGGAAGGGTATGAAGAGCTCGATGCTATTATTGCATACAGATTGGCAATAAAGACATGGGCAAATTGGATCGATTCCAATGTGAACAGAAGCAGCACAAGGGTCTTTTTCACTACAGCATCCCCCACACACATGCGGAGTGCAGATTGGAAAGGAGAGAAGCCGAATCGATGCTTCAATGAGACAAAACCGGTTACTGAAAGAGGATATTGGGGGAGTGGCTCTGATAAAAAGATGATGGAGGTGGTTTCAAGCGTTGTGGGAAAGATGAAATTCCCTGTTACCTTCATCAATATAACTCAGCTCTCGGATTACAGGAAAGACGGCCATGTGTCGATATACACAGGAGAGCTGACAGACAAGCAGAAGGCGAATCCACAGGAATACGCAGATTGTATTCATTGGTGCTTGCCTGGAGTTCCCGATACCTGGAACCAAATATTGCTTGCATATTTGTAAGATTGAAGCAAAGATCCGTGCCAAAACTTGGCTTAGATCAGTTAAAACACATTCAAGTGTTTTTGTGTATCAAATTTGAAGGAAAAAACTAAATGATTTAGGTATTTTTTGCTTTATTTTTTGTTTTTTTTGAAATAAGGCAAGCTTCAAATAAGAAGCAAATATGATCGATGAGAATTGAATGCATAATATAATATAAGATAATAAATTCAGAATTCTAATCACTAGACTACAATACCATTCACTTTTAGATTGTTCTTTAATATACACACAGGAATTTTAGGGGTTTCACAAGAACAACTTCCACATGTGCAAATAAGTTTATACTGTTCAGTGTTTCCGACCACAATGACTTCAATTTGACTAAATTGACAGAAGTTTTATTTTAAAAAAGGTTAATTAGAGATCATTGCTTTGTTTAAAACGATCCCATAAACATTCCAAACTTTATCTAAGAAAATACTGTTGTCAGATATATCTTTAAGCACAAAGGTCACTATCCAAGAAGAGATTAAAATCATTACTGTTTGGATTGGCAATAGATCCACGAATAAACCACTCTTCCCTGTGGAAATGAATAGAAAGAAGGTATTAGAAGGAGCTTAAGAATGTATTGGAATGGTTACGGATAAACCGGAGGCGAAACCGACGTAAAATGAATTCCGGGACAAAAACTGATTTTTGGGCGTGGGAGCCTAAATCTTTGTTTTTCTGGCTGTTTTGGCCGAGAGGCGAGCGCTTAAGCTTGCCCTAGTGCACACTAAAGACATTTTGGACATCGTAAACCCGAGCAGTGGGCGCCTACGCCGAGCAGACGTGAAAAACATATTTTTTTCAAGTGAAACACCTAATTTTGGGCCTTTTTTGGGCACAATATAAATAGCTCTATGATGATTTAGATTTTGTGTGATAAGTCAAAAGCATAGTAGATATTTTTTATTTTCTTGGGGTTTTGTGACAATCTTTTGAAGGCTATGGTCGATGGCTGCTAAGGTTAGGAAGTGGCTTGTAATCTCCTCCTTCACAATTAGTAAAATTCCTCCTCTCCACATCAAACCACATAAATTTAGGTGTTGTGTTGTTTTTGAAGTTTTTATTCTCCACTTTTGTTTTATTTGCTTCAAGAGCTTTCAAACTTTATAATGACAGCAAGTTCCTCAGTGCCAACGTTCTCAACATTCCCTCTCATGAATTGTGTTGTCTATAGATTACCTTCCAAGAATGATCAATGGCGCCACTTTCCAACTGATCCCATTACTGCCACAAAACCCTACAATATTGAACAAATTTGTTCTATTGTAACAGCCTTTTTAATATAAATCAACCTCCTTCATCAATTATTAAAGAAAACACATTTCATAATCTTCTTTACAATAAATCCATGGATTTTACTTGTTTTGAGGTCATTGGATATCTTACTTTTCAAGTTATA

Network for GWHGAAEX000767

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14416.5	PMR5N	83	135	1.40E-17
PF13839.5	PC-Esterase	137	420	1.30E-100

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.850
SRP064423	SRR2545915	Juvenile tuber	1.030
SRP108465	SRR5643513	five period of Gastrodia elata	0.710
	SRR5643514	five period of Gastrodia elata	0.660
	SRR5643515	five period of Gastrodia elata	1.010
	SRR5643524	five period of Gastrodia elata	0.800
	SRR5643525	five period of Gastrodia elata	93.800
	SRR5643528	five period of Gastrodia elata	77.400
	SRR5643658	five period of Gastrodia elata	179.850
	SRR5643659	five period of Gastrodia elata	0.680
	SRR5643660	five period of Gastrodia elata	0.380
	SRR5643661	five period of Gastrodia elata	0.370
	SRR5643662	five period of Gastrodia elata	0.400
	SRR5643663	five period of Gastrodia elata	0.890
	SRR5643664	five period of Gastrodia elata	0.500
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.610
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.340
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.510
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.590
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.990
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.860
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.500
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.690
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.340
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.340
SRP279888	Gastro	Gastrodia elata tuber	0.44
	Juven	Juvenile tuber	0.43
	Mother_Gastro	Mother tuber of Gastrodia elata	0.62
	Mother_Juven	Mother tuber of Juvenile	0.29