Detail information of GWHGAAEX000770/evm.TU.scaffold_100.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30615.00E-56Proteasome maturation factor
nrgi|743806815|ref|XP_010927826.1|3.96E-72PREDICTED: cyclin-B1-2-like [Elaeis guineensis]
Swissprottr|Q0DWQ7|CCB12_ORYSJ2.00E-32Cyclin-B1-2
trEMBLtr|A0A0A0KUK6|A0A0A0KUK6_CUCSA2.00E-59Uncharacterized protein {ECO:0000313|EMBL:KGN52569.1}
TAIRAT1G672505.00E-56Proteasome maturation factor UMP1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000099452741461305+
Transcript Sequence

Network for GWHGAAEX000770

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05348.10UMP1101277.50E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11599POMP, UMP1 Proteasome map03050

Gene Ontology

GO term OntologyName
GO:0043248Biological Processproteasome assembly

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms54.500
SRR2545915Juvenile tuber60.770
SRP108465SRR5643513five period of Gastrodia elata126.800
SRR5643514five period of Gastrodia elata134.380
SRR5643515five period of Gastrodia elata126.440
SRR5643524five period of Gastrodia elata124.910
SRR5643525five period of Gastrodia elata119.110
SRR5643528five period of Gastrodia elata101.830
SRR5643658five period of Gastrodia elata83.760
SRR5643659five period of Gastrodia elata135.660
SRR5643660five period of Gastrodia elata129.690
SRR5643661five period of Gastrodia elata153.830
SRR5643662five period of Gastrodia elata116.170
SRR5643663five period of Gastrodia elata119.530
SRR5643664five period of Gastrodia elata105.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_183.800
SRR6049655Rhizomagastrodiae_C368-T10_good_1189.400
SRR6049656Rhizomagastrodiae_C368-T07_good_192.050
SRR6049657Rhizomagastrodiae_C368-T07_good_163.820
SRR6049658Rhizomagastrodiae_C368-T04_good_163.190
SRR6049659Rhizomagastrodiae_C368-T04_good_148.040
SRR6049660Rhizomagastrodiae_C368-T01_good_159.220
SRR6049661Rhizomagastrodiae_C368-T04_good_162.360
SRR6049662Rhizomagastrodiae_C368-T01_good_1102.580
SRR6049663Rhizomagastrodiae_C368-T01_good_181.920
SRR6049664Rhizomagastrodiae_C368-T10_good_1132.600
SRR6049665Rhizomagastrodiae_C368-T10_good_1132.600
SRP279888GastroGastrodia elata tuber 99.76
JuvenJuvenile tuber116.70
Mother_GastroMother tuber of Gastrodia elata 44.05
Mother_JuvenMother tuber of Juvenile 61.79