Detail information of GWHGAAEX000774/evm.TU.scaffold_100.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25920Tumor differentially expressed (TDE) protein
nrgi|125583978|gb|EAZ24909.1|0hypothetical protein OsJ_08689 [Oryza sativa Japonica Group]
trEMBLtr|A3AC70|A3AC70_ORYSJ0Putative uncharacterized protein {ECO:0000313|EMBL:EAZ24909.1}
TAIRAT1G161800Serinc-domain containing serine and sphingolipid biosynthesis protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000099522469544166+
Transcript Sequence

Network for GWHGAAEX000774

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03348.14Serinc94142.80E-118
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms110.050
SRR2545915Juvenile tuber98.820
SRP108465SRR5643513five period of Gastrodia elata118.030
SRR5643514five period of Gastrodia elata119.380
SRR5643515five period of Gastrodia elata113.940
SRR5643524five period of Gastrodia elata126.080
SRR5643525five period of Gastrodia elata148.470
SRR5643528five period of Gastrodia elata141.070
SRR5643658five period of Gastrodia elata178.150
SRR5643659five period of Gastrodia elata108.870
SRR5643660five period of Gastrodia elata109.110
SRR5643661five period of Gastrodia elata114.190
SRR5643662five period of Gastrodia elata109.800
SRR5643663five period of Gastrodia elata113.620
SRR5643664five period of Gastrodia elata110.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1129.510
SRR6049655Rhizomagastrodiae_C368-T10_good_1126.970
SRR6049656Rhizomagastrodiae_C368-T07_good_1131.230
SRR6049657Rhizomagastrodiae_C368-T07_good_1126.290
SRR6049658Rhizomagastrodiae_C368-T04_good_1136.650
SRR6049659Rhizomagastrodiae_C368-T04_good_1156.520
SRR6049660Rhizomagastrodiae_C368-T01_good_1121.500
SRR6049661Rhizomagastrodiae_C368-T04_good_1134.610
SRR6049662Rhizomagastrodiae_C368-T01_good_1128.740
SRR6049663Rhizomagastrodiae_C368-T01_good_1127.330
SRR6049664Rhizomagastrodiae_C368-T10_good_1158.190
SRR6049665Rhizomagastrodiae_C368-T10_good_1158.190
SRP279888GastroGastrodia elata tuber 86.87
JuvenJuvenile tuber92.23
Mother_GastroMother tuber of Gastrodia elata 91.00
Mother_JuvenMother tuber of Juvenile 76.12