Gene detail

Detail information of GWHGAAEX000775/evm.TU.scaffold_100.24

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672133090\|ref\|XP_008790148.1\|	6.69E-68	PREDICTED: uncharacterized protein LOC103707437 isoform X3 [Phoenix dactylifera]
trEMBL	tr\|F6HYL1\|F6HYL1_VITVI	2.00E-46	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB59775.1}
TAIR	AT3G54740	2.00E-19	Protein of unknown function, DUF593

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000099	580672	585008	-

Transcript Sequence
>GWHTAAEX000775 AAAAAAAAGTAACAAAAAATAATAATTTAAGGTATCTTAAATTTAAAGAAAATGCGGAAGAAGGAGAAAAAATGGCAAACCTATCGGAAGCGGAAGCGAATGGCAGCGACAGCCGGTAAACGGAACCCTAGTTTGGGGACGAGAGCTAAAGGGGAAAGCTTGAATGAGTCGGAAAAGGAAAAGAGGGGACCGCGGAAAGAAAAGGGAAGCGTTCTTTATTAATCTCGGATGCTTCGACGTTCGTACTCTGGACACTGTTTTACTTACCATTACACGATAATGGATGCCAAATAATTGGAATCCGCGAATGTTCAAATGGGAAGCTGCAGCGGGAATATGGGCTTCGGATTCCTCGTTGAAGCCAGCTTTGTTAAGCCCTCTGTCCTCCCTCCTTTATAGGCCTCCTTTCCCCTGAAAATAGCAGAAAAAAACGCAATCAATTTGCTGAGAATAAAACATGGAAACCGAAGCAAGAACACTGACACAATATCGACTTCCGAGAAGATAACATGTCCAGTGAAATAAAGCTAGATCGACAGGGAATTTATGCTGAAGCGTTCTACAGTTTTTACGAAACTCTCAATTGCTTTTAAACTCACATATTTCTATTTTATTTCTCTTAATGGTAAGCTTTCACAGCCCCTACGCACCATCATAAATTTTAAACGTCAAGAGAAGAAGATATTTCTTTTTTAAACATCAAGCTATTTTCGAAGAAATTTTCTTAAATTTTGTTTATAACCTATAAACATTGTTTTATTTGTTTGATACTTTTTTTTTTTTTTTAATTTGGAAAACATGGGATATTGTTTAAGTTCATGGCATGCTTCAAGTTATTTCAAGTTCTACCAGATTGGAAGTTTTCTTTAGTTCTTTTAATAGTTATGGATGCACTCTCCTGGCCTTTTCAAGGTTAGCTGACAGTCTGCTTCTTCACCACTGTTGATAGTTCGTTGATAGTGATCTATCATGTATTTTATGCGGATGACCTCTAATTGGCAAGGAGTCAAGCTCCTCTCTCTTAACATTATGTCTTTCTCTTAACAACTTTGATGTTGGTTTACCGATTATCATCCGGTTTGAGAGAACTTTTACCAAATTCTTGGTGTGGGTCCAATTCACTAATTTGAAACAGATCTCTTATTGTATGCAAAATCCACTTTTTATTGTGATGGATGTATTCTGATAAGCTATTAGAAATGCATTTGGTTCCTTGAGAGCAGGAACCAAGCCACTGAGCTAGAGGAAAGATCAGAGGGAGGGCAAGGTTTAAAGAAGAAAGAAAATAGAAACTAGATGAGATCAGAGGTATTTGGTAAGGAATGAAAGTAAAGATAAGAAGAAGTAAGATAATTCCTTTTCATTCCATTCCCAAGCTTACAAAATTTAGAGAAATAAAATAAAAAAATGCAATAATTATAGAATTCAACCACTTTAAGAATATTTCTTATACCACTTATGTAATTCCTCTTTCTTATTAAGATTTCATGGTTATTTCTCTATAAGCATCCTCAATCATTGATATTATTCGTTATTCTTGATGGTAGTTCAATTCATCACCTTTGTCTTTAATGCTTCTAGTGCCAATGGTGGTTCACTCCCATCATCAACAATAACGACAATGACACCAAGGTTTTATCTCACCAGGTGGGGTCAGTTACATCAATCCTTTGTTTCCATAAATAGTTTTGCCAGGCTGGGAAATAATTCTATCTTTGAGGTTGAGATTAGTATGTCTTACATCATATGAGAACTTTCTCTATCTTTAAGATCTATGGATCTTTAACATCATAGCAGCACTCATGATAAAAATAGAAAGCTATCACGTTTAATATTTTCTGAACAGTTACTCATCATTTTGTTTAATGATTAATTTCATATGCCCTAGTGAAAGCTGAAATCACCACTTGATCATAGTTTAGTGAAAAGTTAAGTGCAATCCAAGAAACCTTGGTATCATCCGTTGGTACAAGTGTGCGTGTGTGCGACTTGTTCCTCAGCTCCTCATTCAAAAAACATAAGTACAACAAAGCAAAAGTAGTAACTAAATGCTTGAGATTTCATTTATTTCATATTATTCAGTTTTAAAGTGTTTGAGGCAGTACAAAGGCAACTTAACTTTTACCGCACTTGCGTAATTAGGAGCACAAAAAAAATTTCTAGATATGGCTGATGGAGAGATTGCTTCTCTAAAAGAAGCTCTCTGGAATCAATACCTCATCATGAGGAAACTGTATGCTGAGCTTGAGGAAGAAAGAGAAGCTTCCGCCACTGCCGCCACTGAATCTCTATCCATGATTCTTCGCCTGCAGAGGGAGAAGGCCTCAGAGAAGATGGAGGCTTGTCAATACAAGAGAATGGCAGAGGAAAGGATACGTCATTCCGACATGTCATTGGAGATACAAGAAGAAGCTGCTCAGCAGAAAGACATGGAAATTGAATTTCTCAGATTTCATCTCATGGCTTACAAGCAAAAACTGATAAATCTTGAAAGCAGCATTCCATTTTTTGGGGAAAAGATGCTTTCTGAAAACAAATCTTCTATCGAGCTTGATGCAGGATCCTGTAAATATTGTTTTAATGATATTTTTAGAAGGAATGCTTCCTTGCTTTCACTTTGCAATAATGATTTTTGTTCTATTAAGGGATTCAGTGATGAAAAGACTGCTGGTTATTGTTCTTGTGTGCTGAACAATGAAGTGCAAAGCACTTCAATTATTGGATCCATGGGCTCCTGGTTATCTGCATCTGGTAGTGATGTTTCCACTTGTTCTACCAAAAGAGACAAAAGCATGACCTCAGATAATGATGCTATTTTGATTTCACCTTCTCAAATTGAAGTTAACGAAAACGAAAATCTTTCAAGCCTAGAAAGACAATTTAGCGAGAATGCGATGCATTATACCCCTCTTTCGGATGAGTTTGAGGTTTCGTCGATTCATGACGGCTGCAAGTCTGGTGAACGTTGTAAAAAGTTACTGCATGATACGCTCTTTGAGACTAATTCAATAAGCGAAGCGCCAAATTTGATGCCAAAGGAAGCTAAAGTTTACCTTTTCAATGATGATGAGTGCCTGAGCAAAGCAATCATGGGCAATCACAATGGGAGAAAGTTTTCTATGCCTGCCAGGGGAGCCATCGTTTCAACAAAAAGCAAGATGTCAACACAGAAGAAGAGTACTTATGTTCCTCATTTTGACTTTGAGCAGCTTAGTAGAAGGTTGCAGCAGCTTGAGGATGAGAGGGTTATCTTGCAGGTGGATTCTGAGAGAGGAAAGGAGCAGACGAAGTTGTTGAGGGAAATGCTCAAGAAGCTAAATACAATAGAAACTCTTATTGGAAGGTCAACTTCAAAGAAGAGTTCTTCTATGGACGAGTCCTCCTATGTCTCAGTAATGGAGGTTTGCGTTTGCTACTTTTTAATAGAATTTTGCATCAATCAATTCAAGTTTAATGCAGTAAAAAATTTTCTATTTGCAATGCAAGTGGCGGGTAGGGGCGCAACTGAGTCAAGCTGTCTCGTGAGCTGTTCGAGCTCAGGTTGATAAAGTGGTTTATGAGCGGAGCTCGATGAGCTAACGCATTAAAGCTGGAATCGACCTTGATTCAGTTCGACTAGATTCTATATAAATTTATTAAATATAATAATAGTTTAATTTTTGTACCAGTCAATTAGCACTTAATGATTTCTCATATAAATTCATAATATTTTATCTCTTAAAGTATAAATTAATAGACCCTTGAGACAAGCTCGAATGTGAATTATTAATTAAAAGTCAACTTAAAAACTTGGGACAAACTCAAGTGCGACTAGGCTCATTTACACAGCTTGTGATGGGGTTGTTTCTCAAGCATTGAAATTGAATAAAATTTGTTTTCTAAATTTTTTCTATGCTTAATCTTTCAAATGATTTCCTGAGGTTGTTTATGTTGTTACAGGCAGCTCTATCGTTCTCGATTTAGTCGGCCAATTTGATGCCTTATTGAATTTGCTTCATGCACAAAGTCTAGAACAGAAATCTTCTGAAAGAGAGATTTCATTAACGCCATTGATTTTTATAGAGGGAGCTGCAGCAGCTTATGAATTGTCAGCTTCTTTTTCATTTTCTATTATTCTGTTTGTGTTTCTTCACTGTGGAATAGAAAGCACATCATGGATTTGAACACAAATGAATTGTCAAACATTGCCTATGGCTTGCAATAATTATACTCTTCTTATAAGAAAAT

Network for GWHGAAEX000775

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04576.14	Zein-binding	8	97	7.90E-27

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.290
SRP064423	SRR2545915	Juvenile tuber	4.490
SRP108465	SRR5643513	five period of Gastrodia elata	4.420
	SRR5643514	five period of Gastrodia elata	5.620
	SRR5643515	five period of Gastrodia elata	5.400
	SRR5643524	five period of Gastrodia elata	5.960
	SRR5643525	five period of Gastrodia elata	6.500
	SRR5643528	five period of Gastrodia elata	6.570
	SRR5643658	five period of Gastrodia elata	6.830
	SRR5643659	five period of Gastrodia elata	3.640
	SRR5643660	five period of Gastrodia elata	3.750
	SRR5643661	five period of Gastrodia elata	3.610
	SRR5643662	five period of Gastrodia elata	4.030
	SRR5643663	five period of Gastrodia elata	3.550
	SRR5643664	five period of Gastrodia elata	4.210
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.330
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.450
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.900
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.600
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.350
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.790
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.350
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.150
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.890
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.020
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.910
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.910
SRP279888	Gastro	Gastrodia elata tuber	3.71
	Juven	Juvenile tuber	1.89
	Mother_Gastro	Mother tuber of Gastrodia elata	4.54
	Mother_Juven	Mother tuber of Juvenile	1.69