Detail information of GWHGAAEX000777/evm.TU.scaffold_100.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17212.00E-109FOG: Zn-finger
nrgi|743799364|ref|XP_010925456.1|3.90E-142PREDICTED: zinc finger protein NUTCRACKER [Elaeis guineensis]
Swissprottr|Q8H1F5|IDD7_ARATH1.00E-109Protein indeterminate-domain 7 {ECO:0000303|PubMed:16784536}
trEMBLtr|M0SW74|M0SW74_MUSAM2.00E-136Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P06450_001}
TAIRAT1G551102.00E-109indeterminate(ID)-domain 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000099776294778838-
Transcript Sequence

Network for GWHGAAEX000777

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.750
SRR2545915Juvenile tuber37.870
SRP108465SRR5643513five period of Gastrodia elata66.600
SRR5643514five period of Gastrodia elata96.820
SRR5643515five period of Gastrodia elata77.740
SRR5643524five period of Gastrodia elata84.150
SRR5643525five period of Gastrodia elata36.950
SRR5643528five period of Gastrodia elata36.190
SRR5643658five period of Gastrodia elata38.060
SRR5643659five period of Gastrodia elata73.700
SRR5643660five period of Gastrodia elata93.900
SRR5643661five period of Gastrodia elata79.870
SRR5643662five period of Gastrodia elata85.220
SRR5643663five period of Gastrodia elata78.770
SRR5643664five period of Gastrodia elata108.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1128.440
SRR6049655Rhizomagastrodiae_C368-T10_good_189.850
SRR6049656Rhizomagastrodiae_C368-T07_good_1120.400
SRR6049657Rhizomagastrodiae_C368-T07_good_1133.460
SRR6049658Rhizomagastrodiae_C368-T04_good_1137.630
SRR6049659Rhizomagastrodiae_C368-T04_good_1145.930
SRR6049660Rhizomagastrodiae_C368-T01_good_1149.840
SRR6049661Rhizomagastrodiae_C368-T04_good_1151.310
SRR6049662Rhizomagastrodiae_C368-T01_good_1111.920
SRR6049663Rhizomagastrodiae_C368-T01_good_1141.180
SRR6049664Rhizomagastrodiae_C368-T10_good_1111.570
SRR6049665Rhizomagastrodiae_C368-T10_good_1111.570
SRP279888GastroGastrodia elata tuber 123.08
JuvenJuvenile tuber57.48
Mother_GastroMother tuber of Gastrodia elata 156.67
Mother_JuvenMother tuber of Juvenile 91.94