Detail information of GWHGAAEX000780/evm.TU.scaffold_100.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32392.00E-97Density-regulated protein related to translation initiation factor 1 (eIF-1/SUI1)
nrgi|224092186|ref|XP_002309499.1|1.69E-109eukaryotic translation initiation factor SUI1 family protein [Populus trichocarpa]
trEMBLtr|B9HDM0|B9HDM0_POPTR6.00E-110Eukaryotic translation initiation factor SUI1 family protein {ECO:0000313|EMBL:EEE93022.1}
TAIRAT5G119002.00E-97Translation initiation factor SUI1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000099908811960042-
Transcript Sequence

Network for GWHGAAEX000780

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01253.21SUI11091823.60E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006413Biological Processtranslational initiation
GO:0003743Molecular Functiontranslation initiation factor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.880
SRR2545915Juvenile tuber56.460
SRP108465SRR5643513five period of Gastrodia elata55.170
SRR5643514five period of Gastrodia elata63.010
SRR5643515five period of Gastrodia elata54.250
SRR5643524five period of Gastrodia elata60.890
SRR5643525five period of Gastrodia elata52.780
SRR5643528five period of Gastrodia elata46.640
SRR5643658five period of Gastrodia elata53.460
SRR5643659five period of Gastrodia elata42.920
SRR5643660five period of Gastrodia elata44.670
SRR5643661five period of Gastrodia elata43.730
SRR5643662five period of Gastrodia elata42.260
SRR5643663five period of Gastrodia elata48.030
SRR5643664five period of Gastrodia elata39.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.320
SRR6049655Rhizomagastrodiae_C368-T10_good_154.780
SRR6049656Rhizomagastrodiae_C368-T07_good_147.250
SRR6049657Rhizomagastrodiae_C368-T07_good_140.300
SRR6049658Rhizomagastrodiae_C368-T04_good_137.880
SRR6049659Rhizomagastrodiae_C368-T04_good_142.630
SRR6049660Rhizomagastrodiae_C368-T01_good_136.740
SRR6049661Rhizomagastrodiae_C368-T04_good_135.910
SRR6049662Rhizomagastrodiae_C368-T01_good_153.260
SRR6049663Rhizomagastrodiae_C368-T01_good_142.610
SRR6049664Rhizomagastrodiae_C368-T10_good_172.250
SRR6049665Rhizomagastrodiae_C368-T10_good_172.250
SRP279888GastroGastrodia elata tuber 47.49
JuvenJuvenile tuber46.23
Mother_GastroMother tuber of Gastrodia elata 48.13
Mother_JuvenMother tuber of Juvenile 34.71