Detail information of GWHGAAEX000784/evm.TU.scaffold_100.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17521.00E-25Glutaredoxin and related proteins
nrgi|672118603|ref|XP_008782514.1|4.48E-30PREDICTED: glutaredoxin-C7-like [Phoenix dactylifera]
Swissprottr|Q0DK35|GRXC7_ORYSJ3.00E-27Glutaredoxin-C7
trEMBLtr|A0A077RQG4|A0A077RQG4_WHEAT3.00E-30Chromosome 3B, genomic scaffold, cultivar Chinese Spring {ECO:0000313|EMBL:CDM81618.1}
TAIRAT4G330401.00E-25Thioredoxin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009911674141168447+
Transcript Sequence

Network for GWHGAAEX000784

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis
GO:0009055Molecular Functionelectron carrier activity
GO:0015035Molecular Functionprotein disulfide oxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.410
SRR2545915Juvenile tuber4.320
SRP108465SRR5643513five period of Gastrodia elata56.170
SRR5643514five period of Gastrodia elata33.290
SRR5643515five period of Gastrodia elata44.530
SRR5643524five period of Gastrodia elata27.360
SRR5643525five period of Gastrodia elata1.110
SRR5643528five period of Gastrodia elata0.960
SRR5643658five period of Gastrodia elata4.010
SRR5643659five period of Gastrodia elata101.190
SRR5643660five period of Gastrodia elata66.530
SRR5643661five period of Gastrodia elata59.830
SRR5643662five period of Gastrodia elata72.010
SRR5643663five period of Gastrodia elata94.740
SRR5643664five period of Gastrodia elata101.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.480
SRR6049655Rhizomagastrodiae_C368-T10_good_115.140
SRR6049656Rhizomagastrodiae_C368-T07_good_134.410
SRR6049657Rhizomagastrodiae_C368-T07_good_127.440
SRR6049658Rhizomagastrodiae_C368-T04_good_115.040
SRR6049659Rhizomagastrodiae_C368-T04_good_16.110
SRR6049660Rhizomagastrodiae_C368-T01_good_18.920
SRR6049661Rhizomagastrodiae_C368-T04_good_115.970
SRR6049662Rhizomagastrodiae_C368-T01_good_115.500
SRR6049663Rhizomagastrodiae_C368-T01_good_17.220
SRR6049664Rhizomagastrodiae_C368-T10_good_136.760
SRR6049665Rhizomagastrodiae_C368-T10_good_136.760
SRP279888GastroGastrodia elata tuber 82.83
JuvenJuvenile tuber134.23
Mother_GastroMother tuber of Gastrodia elata 4.40
Mother_JuvenMother tuber of Juvenile 40.20