Gene detail

Detail information of GWHGAAEX000788/evm.TU.scaffold_100.46

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|427736030\|ref\|YP_007055574.1\|	2.00E-46	cytochrome P450 [Rivularia sp. PCC 7116]
KOG	KOG0157	3.00E-162	Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
nr	gi\|743769841\|ref\|XP_010915214.1\|	0	PREDICTED: cytochrome P450 90D2-like isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q94IW5\|C90D2_ORYSJ	0	Cytochrome P450 90D2
trEMBL	tr\|M0TG51\|M0TG51_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P09630_001}
TAIR	AT3G13730	3.00E-162	cytochrome P450, family 90, subfamily D, polypeptide 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000099	1406198	1410003	+

Transcript Sequence
>GWHTAAEX000788 ATATATATATATATATATAAATTCAGTAAAATATCTATTTTTATTTGTGTTGTAAATGTATTCATTAGAATGAAATTGACATGCCCCAATCTTCAACAAAAAAATGTGAGGCACAAGAGAGCATGTGTGGCTGGCGTCGTCGCTCCAGTCCAGCACAGTTTCCCTAGAAGTCCAGCCTCTCTCTCATCTATTTCCAGAACGCTCCCATTTGCGGCTCCATCATCATCATCATCATCCACTCTCCCCTTTTATATTAATCCCCCGTGCCTGCACATCCCGCCCACTCGTGCGCTTATCCTGATCTTAAAAAAAAATGGCGGCAGCCATCCTTCTAATCATGATTCCGCTCTGTCTTCTCATCGCCACCGCTTACCGTCTCCGACGCACGGGGGCGTCCGAATCATCCGTACTGCCACGCGGCTCCCTCGGGTGGCCGTTCCTTGGCGAGACCCTGCAGTTCGTCTTCGCTGCGTATTCCCCCAAGCCGGAGTCCTTCATGAACCGCCGGCGCCTCCTGTACGGCCACGTGTTCAAATCTCACTTGTTCGGGAGCCCTACGATCGTGTCGACGGACGCCGAGGTGAGCCGCTTCGTGCTTCAGAGCGACGCCAAAGTGTTCGTCCCCTCCTACCCCAAATCCCTGTCGGATCTCATGGGCAAGTCCTCCATCCTGCTAATCAACGGTCCGATCCAGCGCCGCGTCCACGCCCTCATCGGCGGCTTCTTCAAGTCTCCCCTCCTCAAGTCCCAGATCACCGCCGACATGCAGTCGCACGTGCGCCGGGCCATGGCCTCCTGGCCCGAATCTAAGCCCGTCCTAATCCAGGACCAAACCAAGCATATTGTGTTCCAGATACTGGTGAAGGCCCTTATTGGGCTCGAGCCCGGCGACCAGATGCGCCTCCTCAAGCAAGAATTCCACGAATTTATTGCTGGATTGATGTCCGTCCCCGTGAACCTCCCCGGGACCAGGCTTTTTAGATCCCTTCAGGCGAAGAAGAGGATGGCGATGCAGGTGAAGAGGATCATCGAAGAGAGGAGGAGGAGGAGGAGTGAAAGAAGAGGAACGAAGGACGTTATCGACGCCCTGATCAACGACCCCAGCGGCACGTTGACCGACGACCTCATTTCGGATAATATGATCGATCTCATGATCCCCGCCGAAGACTCCGTGCCCGTCCTCATTACCCTCGCCGTCAAGTATCTCAGCGAATGCCCTCTCGCTCTCCGCCAGCTGGAGGAGGAGAATATGGAGCTTAGGATGAGGAGCGCCGGGAAGGGCCAGGATTGCTTGCAGTGGAACGACTACATGTCCTTGTCGTTCACACAAGACGTGATTACGGAGACGCTTAGGCTGGGGAATATAATAGGAGGCATCATGCGCAAGGCGGTAAGGGACGTCGAGGTGAAGGGGCACTTCATACCTAATGGCTGGTGCGTCTTCACTTACTTCAGATCGGTTCACCTCGACGATGCCATATATGACGAGCCTTTCAGCTTCAATCCATGGCGGTGGAAGGTAATTAATTACTCGTGGAGCCTGAATGCGCGCGCTTGCTGTGCATTTAAATAAATCAAAGAGCAGATGTAAAATTTAATGCAAAATTCCTTATCGTAATTGCTGTCTAAAATAGAGATGTTTTACATCGAAAGTGGACCATTTCCCTCTATATGAATGAATACCTTTCTTTTTATTATATGTTTTGATATGTTTCCTGATCCACAGGAAAAGGAGCCGAGTAATTGCAGCTTCACTCCTTTCGGAGGTGGCCAGCGCCTCTGTCCCGGCCTTGATTTGGCCAGACTGGAAGCTTCCATCTTCCTCCACCACCTGGTCACCAACTTCACGTAAGAGAAGTCTCTCCATCTTTTCACCCCCCCCCCTTCTTCTTACATGCTGTAATTATTGCCCGTGAAGACCATGCATTTAACAAGTATATACAGCCAAAGTTTGGAATATTGCCACGAACTGGCATGTGCATAATTAAATAATAATATGCCTCAGAGTCCCTTTTTCGTGGAGATGATTATATAGATGATGGTTGGGACAAGTTCTCTCGACGCAGCCACACAGATTTTACGCGCCGGAGCCGAACTTCGACCGTTGCAGAATATTAAATATATTATTAGTCACTAAGTAAATAGTTTAATATACGTTTTGCTGCTGACTCATCAAAAGAAATAAATAAAAAGAGGGTGCCGCACGAATGCATGCTTTCATGGCGCACGGCTTCCTAACGCCAGCGTTTCTTCTGCTGACAGGTGGGTGGCCGAAGATGACCAAGTGGTCAACTTCCCGACGGTACGGATGAAGTCAGGAATGCCTGTACGTGTGACAAGGAGGATGAGCTCGTCATGTTCCCATCCGCACGTGTGCTGCCCCGGCTGTGCGCATGGGTTAGGTGCTTAGGTCATGATTCAAAAAAATTTTGATGCCAAGTGTAAAGTAAGTGATTATTTATCGCTAATTAAGTACTGTTCATCATTTATTAAAGTGATTTTTTATTAACTCAAAAACAGTGTGCCATTCATTGGCTGAGACTTTTCTACTCGCACGCTTAGCCTATAAAAATATATGAGCAAAGCAGCAGCAGGCCGATCTGTATGTATTTTAGTAAACAGGGATTACTTGCATAGATTTAATGGGAGAACAGAGTAAAGGTGGGGTCTTCGATTTGACGCAGGAACGCCATACGAGCAGCAGCAGCAGCAGCAGCATCAGTTGATAATTACTCTTTTGAAGTAGCAGCTCTCCTTAATATATATATATATATAT

Network for GWHGAAEX000788

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module13

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	34	402	1.00E-34

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP90D1

KEGG pathway

KO	Enzyme	pathway	mapID
K12638	CYP90D1	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Brassinosteroid biosynthesis	map00905

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	Molecular Function	iron ion binding
GO:0020037	Molecular Function	heme binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.140
SRP064423	SRR2545915	Juvenile tuber	2.300
SRP108465	SRR5643513	five period of Gastrodia elata	4.470
	SRR5643514	five period of Gastrodia elata	2.740
	SRR5643515	five period of Gastrodia elata	2.400
	SRR5643524	five period of Gastrodia elata	1.960
	SRR5643525	five period of Gastrodia elata	4.280
	SRR5643528	five period of Gastrodia elata	2.400
	SRR5643658	five period of Gastrodia elata	2.250
	SRR5643659	five period of Gastrodia elata	2.360
	SRR5643660	five period of Gastrodia elata	3.250
	SRR5643661	five period of Gastrodia elata	2.940
	SRR5643662	five period of Gastrodia elata	5.230
	SRR5643663	five period of Gastrodia elata	2.690
	SRR5643664	five period of Gastrodia elata	8.460
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.110
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.150
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.630
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.010
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.840
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.620
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.370
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.210
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.290
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.810
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.150
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.150
SRP279888	Gastro	Gastrodia elata tuber	1.75
	Juven	Juvenile tuber	1.20
	Mother_Gastro	Mother tuber of Gastrodia elata	2.01
	Mother_Juven	Mother tuber of Juvenile	2.33