Detail information of GWHGAAEX000798/evm.TU.scaffold_100.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|113477104|ref|YP_723165.1|3.00E-176protoporphyrin IX magnesium-chelatase [Trichodesmium erythraeum IMS101]
nrgi|743770608|ref|XP_010915593.1|0PREDICTED: magnesium-chelatase subunit ChlI, chloroplastic [Elaeis guineensis]
Swissprottr|Q53RM0|CHLI_ORYSJ0Magnesium-chelatase subunit ChlI, chloroplastic (Precursor)
trEMBLtr|A0A059CDA4|A0A059CDA4_EUCGR0Uncharacterized protein {ECO:0000313|EMBL:KCW76166.1}
TAIRAT4G184800P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009917403391742396-
Transcript Sequence

Network for GWHGAAEX000798

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01078.20Mg_chelatase1912612.50E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03405chlI, bchI Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Porphyrin and chlorophyll metabolismmap00860

Gene Ontology

GO term OntologyName
GO:0015995Biological Processchlorophyll biosynthetic process
GO:0005524Molecular FunctionATP binding
GO:0016851Molecular Functionmagnesium chelatase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.190
SRR2545915Juvenile tuber9.540
SRP108465SRR5643513five period of Gastrodia elata15.140
SRR5643514five period of Gastrodia elata21.060
SRR5643515five period of Gastrodia elata13.800
SRR5643524five period of Gastrodia elata17.040
SRR5643525five period of Gastrodia elata13.560
SRR5643528five period of Gastrodia elata9.890
SRR5643658five period of Gastrodia elata13.980
SRR5643659five period of Gastrodia elata18.100
SRR5643660five period of Gastrodia elata11.150
SRR5643661five period of Gastrodia elata13.350
SRR5643662five period of Gastrodia elata18.240
SRR5643663five period of Gastrodia elata18.630
SRR5643664five period of Gastrodia elata17.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.530
SRR6049655Rhizomagastrodiae_C368-T10_good_113.510
SRR6049656Rhizomagastrodiae_C368-T07_good_114.060
SRR6049657Rhizomagastrodiae_C368-T07_good_113.340
SRR6049658Rhizomagastrodiae_C368-T04_good_112.450
SRR6049659Rhizomagastrodiae_C368-T04_good_111.020
SRR6049660Rhizomagastrodiae_C368-T01_good_113.330
SRR6049661Rhizomagastrodiae_C368-T04_good_113.370
SRR6049662Rhizomagastrodiae_C368-T01_good_115.960
SRR6049663Rhizomagastrodiae_C368-T01_good_114.480
SRR6049664Rhizomagastrodiae_C368-T10_good_112.840
SRR6049665Rhizomagastrodiae_C368-T10_good_112.840
SRP279888GastroGastrodia elata tuber 16.11
JuvenJuvenile tuber18.92
Mother_GastroMother tuber of Gastrodia elata 12.82
Mother_JuvenMother tuber of Juvenile 11.25