Detail information of GWHGAAEX000799/evm.TU.scaffold_100.61


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672144151|ref|XP_008795971.1|3.36E-111PREDICTED: uncharacterized protein LOC103711556 [Phoenix dactylifera]
trEMBLtr|W5DJ94|W5DJ94_WHEAT7.00E-93Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_3DS_B12C1908F.2}
TAIRAT4G391404.00E-42RING/U-box superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009917833471811568+
Transcript Sequence

Network for GWHGAAEX000799

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.800
SRR2545915Juvenile tuber24.780
SRP108465SRR5643513five period of Gastrodia elata29.960
SRR5643514five period of Gastrodia elata23.580
SRR5643515five period of Gastrodia elata33.090
SRR5643524five period of Gastrodia elata30.000
SRR5643525five period of Gastrodia elata27.490
SRR5643528five period of Gastrodia elata29.030
SRR5643658five period of Gastrodia elata26.110
SRR5643659five period of Gastrodia elata27.540
SRR5643660five period of Gastrodia elata24.320
SRR5643661five period of Gastrodia elata29.360
SRR5643662five period of Gastrodia elata29.890
SRR5643663five period of Gastrodia elata26.100
SRR5643664five period of Gastrodia elata24.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.430
SRR6049655Rhizomagastrodiae_C368-T10_good_126.090
SRR6049656Rhizomagastrodiae_C368-T07_good_123.170
SRR6049657Rhizomagastrodiae_C368-T07_good_126.200
SRR6049658Rhizomagastrodiae_C368-T04_good_128.280
SRR6049659Rhizomagastrodiae_C368-T04_good_130.340
SRR6049660Rhizomagastrodiae_C368-T01_good_125.090
SRR6049661Rhizomagastrodiae_C368-T04_good_125.650
SRR6049662Rhizomagastrodiae_C368-T01_good_120.950
SRR6049663Rhizomagastrodiae_C368-T01_good_123.250
SRR6049664Rhizomagastrodiae_C368-T10_good_121.250
SRR6049665Rhizomagastrodiae_C368-T10_good_121.250
SRP279888GastroGastrodia elata tuber 24.70
JuvenJuvenile tuber28.92
Mother_GastroMother tuber of Gastrodia elata 45.85
Mother_JuvenMother tuber of Juvenile 43.81