Detail information of GWHGAAEX000808/evm.TU.scaffold_100.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743755969|ref|XP_010914292.1|7.85E-85PREDICTED: uncharacterized protein LOC105039715 isoform X2 [Elaeis guineensis]
trEMBLtr|M0S882|M0S882_MUSAM5.00E-68Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P15410_001}
TAIRAT5G533301.00E-31Ubiquitin-associated/translation elongation factor EF1B protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009921601832210309-
Transcript Sequence

Network for GWHGAAEX000808

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms63.830
SRR2545915Juvenile tuber63.470
SRP108465SRR5643513five period of Gastrodia elata57.130
SRR5643514five period of Gastrodia elata58.940
SRR5643515five period of Gastrodia elata61.020
SRR5643524five period of Gastrodia elata57.200
SRR5643525five period of Gastrodia elata70.180
SRR5643528five period of Gastrodia elata82.620
SRR5643658five period of Gastrodia elata75.920
SRR5643659five period of Gastrodia elata52.860
SRR5643660five period of Gastrodia elata48.710
SRR5643661five period of Gastrodia elata53.390
SRR5643662five period of Gastrodia elata51.610
SRR5643663five period of Gastrodia elata54.880
SRR5643664five period of Gastrodia elata52.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_152.860
SRR6049655Rhizomagastrodiae_C368-T10_good_149.380
SRR6049656Rhizomagastrodiae_C368-T07_good_153.430
SRR6049657Rhizomagastrodiae_C368-T07_good_147.010
SRR6049658Rhizomagastrodiae_C368-T04_good_159.570
SRR6049659Rhizomagastrodiae_C368-T04_good_157.060
SRR6049660Rhizomagastrodiae_C368-T01_good_147.590
SRR6049661Rhizomagastrodiae_C368-T04_good_152.300
SRR6049662Rhizomagastrodiae_C368-T01_good_151.260
SRR6049663Rhizomagastrodiae_C368-T01_good_158.570
SRR6049664Rhizomagastrodiae_C368-T10_good_164.120
SRR6049665Rhizomagastrodiae_C368-T10_good_164.120
SRP279888GastroGastrodia elata tuber 54.36
JuvenJuvenile tuber60.46
Mother_GastroMother tuber of Gastrodia elata 62.27
Mother_JuvenMother tuber of Juvenile 51.09