Detail information of GWHGAAEX000813/evm.TU.scaffold_100.80
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2288 | 2.00E-152 | Galactosyltransferases |
| nr | gi|743799993|ref|XP_010925702.1| | 0 | PREDICTED: probable beta-1,3-galactosyltransferase 14 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q8L7M1|B3GTE_ARATH | 5.00E-159 | Probable beta-1,3-galactosyltransferase 14 |
| trEMBL | tr|B9N639|B9N639_POPTR | 3.00E-172 | Galactosyltransferase family protein {ECO:0000313|EMBL:ERP66738.1} |
| TAIR | AT3G14960 | 2.00E-152 | Galactosyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000099 | 2508971 | 2556800 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000813
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01762.20 | Galactosyl_T | 114 | 307 | 1.60E-46 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006486 | Biological Process | protein glycosylation |
| GO:0008378 | Molecular Function | galactosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 10.100 |
| SRR2545915 | Juvenile tuber | 10.640 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.510 |
| SRR5643514 | five period of Gastrodia elata | 9.110 | |
| SRR5643515 | five period of Gastrodia elata | 7.940 | |
| SRR5643524 | five period of Gastrodia elata | 8.600 | |
| SRR5643525 | five period of Gastrodia elata | 9.250 | |
| SRR5643528 | five period of Gastrodia elata | 6.780 | |
| SRR5643658 | five period of Gastrodia elata | 8.370 | |
| SRR5643659 | five period of Gastrodia elata | 9.520 | |
| SRR5643660 | five period of Gastrodia elata | 9.110 | |
| SRR5643661 | five period of Gastrodia elata | 9.240 | |
| SRR5643662 | five period of Gastrodia elata | 8.590 | |
| SRR5643663 | five period of Gastrodia elata | 10.780 | |
| SRR5643664 | five period of Gastrodia elata | 9.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.970 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 8.880 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.400 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 10.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.510 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.240 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.160 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 12.320 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 12.190 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.680 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 11.530 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 11.530 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.03 |
| Juven | Juvenile tuber | 13.51 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 12.58 | |
| Mother_Juven | Mother tuber of Juvenile | 13.38 |