Gene detail

Detail information of GWHGAAEX000814/evm.TU.scaffold_100.81

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|189219534\|ref\|YP_001940175.1\|	5.00E-63	glycosyltransferase [Methylacidiphilum infernorum V4]
nr	gi\|743840044\|ref\|XP_010937165.1\|	0	PREDICTED: glucomannan 4-beta-mannosyltransferase 1-like [Elaeis guineensis]
Swissprot	tr\|Q67VS7\|CSLA9_ORYSJ	0	Probable mannan synthase 9
trEMBL	tr\|I1LCQ9\|I1LCQ9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G34550.1}
TAIR	AT5G03760	0	Nucleotide-diphospho-sugar transferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000099	2625148	2711069	-

Transcript Sequence
>GWHTAAEX000814 CCAAAGTTCAACGCGGTCGGAGAGACAAAAGTATAGATACTGGGTGCCTGCGCGGCAGTATAGCACGCCCCTGTGAGAATATTGCTCAGTTCTACTCGCTGCTATCAGCGGAGTGCTCTCTATTTCTTCCCTTGCCCCCTTTCACTCTCACTAACCTCTCTTGCCAATGCAAACGGTGTGGATATCCAAAGCAATAGAGCTGCTGCATCTGTCTCCATGGGAGTCGGCTAGAGATCTGATCGGAAGAGCATGGTTCGTGATGAGGTCGTCGGTAGTGGTGCCGATGGTTAGGGCAGCGATTATCTTTTGCCTGTTAATGTCGGTGATGGTACTCTTGGAAAAGCTGTCGATGGGCATCATCAGCCTCTTCGTCAAGCTTTCCCGCCGCCATCCCGATCGCGTCCACAGATGGCAACCCCTTTCCCTTGTCTCTGACACTGATGAAGAAATGGGAATGGGATCCGGCCAGCAGCGGCAATCCTCTTTTCCCATGGTGCTTGTCCAGATCCCGATGTACAACGAGAAAGAGGTGTTCCAGAAGTCAATCGGAGCAGCGTGCGAACTTGAATGGTGTTCTGATCGAATCATAATCCAGGTTCTCGATGATTCGACGGATCCTCTAATTAAGAACCTGGTGAAGGCTGAGTGTGAAAGATGGCACAAAATAGGGAAGAACATAAAATATGAGACAAGGAACAATAGGCATGGATACAAGGCAGGCGCTTTAAAAGAAGGAATGAAGCATAGCTATGTGCAGAGCTGCGATTATGTTGCCATCTTTGATGCTGACTTCCAGCCTGCTTCTGACTTCTTGATGAGAGCTATTCCTTTCCTTATTCATAATCCTGACATTGCACTTGTTCAGGCCCGCTGGAGGTTTGTAAATGCCAATGAGTGCTTAATGACAAGAGTTCAGGAAATGTCCATGGATTATCACTTTAAGGTGGAACAAGAATCAGGCTCATCAGCTATTGCATTCTTTGGATTTAATGGTACCGCAGGAGTATGGAGAATCTTGGCCATATATGAGGCTGGAGGTTGGAAGGAGCGAACAACTGTAGAGGATATGGATTTGGCTGTCAGAGCAAGTTTAGTTGGGTGGAAATTTTTGTATGTTGGTAACATCCAGGTTACAAGCGAACTACCTAGTACTTTTAAGGCCTATCGACACCAGCAGCATCGCTGGGCATGTGGACCTGCAAATCTTTTCCGAAAAATGCTAAATGATATTGTCCATGCCAAGGGAGTTTCTTTCTGGAGAAAATGTCATATTGTCTACAATTTCTTCATAGCCAGACGAATTGTATCACATTTTGTCACATTTGTTTTCTACTGTGTGGTAATTCCTTTGTCGGTTTTCTTTGATGAAGTTCAACTTCCAAAATGGGCGGTGGTTTATGTGCCAACAATCATCACACTTCTCAATTCAATTGGTACGCCAAGCTCATTCCACCTGATCGTATTCTGGGTCTTATTTGAGAATGTTGCTTCATTGCACCGATGTAAAGCCGTCTTAACTGGTCTTCTTGAAGTTGGCAATGTAAATGAGTGGGTTGTTACAGAGAAATTAGGAGATCTTCTGAAGACCAAACCAACCATCAACATTAGAAGAAAACTCCAATTGAAGCTCTGGGATAGGTTTTATTTGTTGGAGCTTGTGGTTGGGCTCTACCTTTTTATGTGCGCATGCTACGATTACAGATACTGCAAAGATCGGTATTTCATATACATCTTTCCACAGTCCATCTCCTTTCTCATTATGGGTTTTGGTTATGTTGGCACCTTTGTTCAAAGTGGCAATCAAGTAGCCAATTGAGTATTTCAATTTCTCCATCATTCATTGTCTTTTATGTACTGTATCTAAAAGGTACTTGCAATAAGTTATTAGACTATGTAGCTATGGCTATTAAAAACAATTGCCCAACAGAATTCAATAAAATTGCTAGTGCCCGCAAATGCATTTAGTTTATGATTTAGTTTTTCTGAGTTATTGTCAGATAAGGTTGAGATGCCTTTTAACTATGGAACTTTAAAACTATGTTTTATCAGATTAGTTTATTGATGAAACAGTTTATGATTTACTTTTTCTGAGTTATTGCCAGATAAGTTCGAGATGCCTTTTAACTATGGAACATTAAAAC

Network for GWHGAAEX000814

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13641.5	Glyco_tranf_2_3	109	343	6.80E-19

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.200
SRP064423	SRR2545915	Juvenile tuber	5.400
SRP108465	SRR5643513	five period of Gastrodia elata	7.770
	SRR5643514	five period of Gastrodia elata	5.340
	SRR5643515	five period of Gastrodia elata	8.640
	SRR5643524	five period of Gastrodia elata	8.280
	SRR5643525	five period of Gastrodia elata	5.730
	SRR5643528	five period of Gastrodia elata	5.150
	SRR5643658	five period of Gastrodia elata	5.010
	SRR5643659	five period of Gastrodia elata	7.740
	SRR5643660	five period of Gastrodia elata	5.040
	SRR5643661	five period of Gastrodia elata	6.430
	SRR5643662	five period of Gastrodia elata	5.120
	SRR5643663	five period of Gastrodia elata	8.310
	SRR5643664	five period of Gastrodia elata	4.280
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.350
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.520
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.130
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.560
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.030
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.420
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.140
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.260
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.660
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.190
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.190
SRP279888	Gastro	Gastrodia elata tuber	3.68
	Juven	Juvenile tuber	10.38
	Mother_Gastro	Mother tuber of Gastrodia elata	8.56
	Mother_Juven	Mother tuber of Juvenile	8.70