Detail information of GWHGAAEX000819/evm.TU.scaffold_100.90


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42824.00E-57Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain
nrgi|695056561|ref|XP_009416507.1|4.14E-112PREDICTED: trihelix transcription factor GTL1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LJG8|ASIL2_ARATH4.00E-37Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|M0SWZ5|M0SWZ5_MUSAM7.00E-106Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P09160_001}
TAIRAT3G586304.00E-57sequence-specific DNA binding transcription factors

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009929687702976980-
Transcript Sequence

Network for GWHGAAEX000819

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.5Myb_DNA-bind_4201111.10E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.670
SRR2545915Juvenile tuber15.130
SRP108465SRR5643513five period of Gastrodia elata31.190
SRR5643514five period of Gastrodia elata25.990
SRR5643515five period of Gastrodia elata34.160
SRR5643524five period of Gastrodia elata26.510
SRR5643525five period of Gastrodia elata41.110
SRR5643528five period of Gastrodia elata50.140
SRR5643658five period of Gastrodia elata38.550
SRR5643659five period of Gastrodia elata42.710
SRR5643660five period of Gastrodia elata37.560
SRR5643661five period of Gastrodia elata41.760
SRR5643662five period of Gastrodia elata42.260
SRR5643663five period of Gastrodia elata38.270
SRR5643664five period of Gastrodia elata55.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.840
SRR6049655Rhizomagastrodiae_C368-T10_good_122.450
SRR6049656Rhizomagastrodiae_C368-T07_good_133.460
SRR6049657Rhizomagastrodiae_C368-T07_good_143.340
SRR6049658Rhizomagastrodiae_C368-T04_good_140.900
SRR6049659Rhizomagastrodiae_C368-T04_good_148.830
SRR6049660Rhizomagastrodiae_C368-T01_good_143.750
SRR6049661Rhizomagastrodiae_C368-T04_good_137.270
SRR6049662Rhizomagastrodiae_C368-T01_good_129.760
SRR6049663Rhizomagastrodiae_C368-T01_good_136.860
SRR6049664Rhizomagastrodiae_C368-T10_good_130.570
SRR6049665Rhizomagastrodiae_C368-T10_good_130.570
SRP279888GastroGastrodia elata tuber 43.68
JuvenJuvenile tuber38.38
Mother_GastroMother tuber of Gastrodia elata 67.59
Mother_JuvenMother tuber of Juvenile 69.39