Detail information of GWHGAAEX000825/evm.TU.scaffold_100.96


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|568819978|ref|XP_006464514.1|1.25E-61PREDICTED: probable WRKY transcription factor 13-like isoform X2 [Citrus sinensis]
Swissprottr|Q9SVB7|WRK13_ARATH6.00E-56Probable WRKY transcription factor 13
trEMBLtr|A0A067DNU1|A0A067DNU1_CITSI6.00E-62Uncharacterized protein {ECO:0000313|EMBL:KDO40261.1}
TAIRAT4G394102.00E-55WRKY DNA-binding protein 13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009932357143247130+
Transcript Sequence

Network for GWHGAAEX000825

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY901462.10E-25
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.090
SRR2545915Juvenile tuber7.530
SRP108465SRR5643513five period of Gastrodia elata32.740
SRR5643514five period of Gastrodia elata27.300
SRR5643515five period of Gastrodia elata22.890
SRR5643524five period of Gastrodia elata30.780
SRR5643525five period of Gastrodia elata30.980
SRR5643528five period of Gastrodia elata11.990
SRR5643658five period of Gastrodia elata27.520
SRR5643659five period of Gastrodia elata3.310
SRR5643660five period of Gastrodia elata6.200
SRR5643661five period of Gastrodia elata4.390
SRR5643662five period of Gastrodia elata9.780
SRR5643663five period of Gastrodia elata2.770
SRR5643664five period of Gastrodia elata12.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.930
SRR6049655Rhizomagastrodiae_C368-T10_good_117.630
SRR6049656Rhizomagastrodiae_C368-T07_good_119.380
SRR6049657Rhizomagastrodiae_C368-T07_good_122.770
SRR6049658Rhizomagastrodiae_C368-T04_good_135.980
SRR6049659Rhizomagastrodiae_C368-T04_good_140.170
SRR6049660Rhizomagastrodiae_C368-T01_good_127.510
SRR6049661Rhizomagastrodiae_C368-T04_good_131.910
SRR6049662Rhizomagastrodiae_C368-T01_good_126.510
SRR6049663Rhizomagastrodiae_C368-T01_good_118.850
SRR6049664Rhizomagastrodiae_C368-T10_good_121.670
SRR6049665Rhizomagastrodiae_C368-T10_good_121.670
SRP279888GastroGastrodia elata tuber 17.94
JuvenJuvenile tuber16.87
Mother_GastroMother tuber of Gastrodia elata 19.64
Mother_JuvenMother tuber of Juvenile 12.89