Gene detail

Detail information of GWHGAAEX000827/evm.TU.scaffold_100.98

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672139331\|ref\|XP_008793447.1\|	3.81E-66	PREDICTED: MAR-binding filament-like protein 1-1 isoform X2 [Phoenix dactylifera]
Swissprot	tr\|Q9LW85\|MFP1_ARATH	2.00E-37	MAR-binding filament-like protein 1
trEMBL	tr\|M0SW51\|M0SW51_MUSAM	1.00E-53	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P06220_001}
trEMBL	tr\|M0SW51\|M0SW51_MUSAM	2.00E-09	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P06220_001}
TAIR	AT3G16000	8.00E-37	MAR binding filament-like protein 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000099	3252311	3290371	-

Transcript Sequence
>GWHTAAEX000827 TTCTGGAGTCTTGAAACCTCTTCAGCAAAGAATGAGGAGCTGAGATTGAACGGGCGGACGGTGCTGGAAGTGTAAGAGAATGAGATCGATGGGGAGTTCAGCATTTTTGCAATCTGGCTTCTACTGTTTCTCGCCGTCCTCTAGCTACCAGTCTCCTCTCTTTTATCCTTCTTACCGGAAGATTGCGAGGAAGAAAAGGGCATCCGTCAGTTCTTCGTTCTGGGACAGCGGGGGGCCCTTAGATGTTTATTATCCCTTCCACGATAAGGTTATCCACTTGGTAGACGTCTCAGCTTATCCTTTCTCGCAGTTAAGAGATGTAGCTGGTGAAGAGCCCGCGGAAGAGATAGGTACAAGTATGTATGAGTTTCAAGGAAGTAAATTGGAAGAATCCCATATTGAAACTTCTGATAGAATGAAAAAAGGAGTTTTTGAACAAAGAAAACTTGATTTGGAAATTGAATCTCAAGATTCTAAAGATGCAGGTTACGTTGAAGCCCAAACTTCTGAGATAAAAAAACTTGAAATCCCATCTCAACAGCTTATGCATATAACGGTTGTGATCGGAGATGCCAAAAATACTCGTAGCAGAATATCACTTGCATCGTTCCTAAATGGGATTGGAATAATTGGTTCAGGCGTGCTAGGTGCTTTATTTACCACCTCTCAGCTGGCGAAGAAAGTTTTGGAATCAACTATAGATTCTGTAAACCACCATGTTCACAAAAACAACCAGTTGATAGCCACTGCTTTGATGAAGGAACACAAGAGACAGATTAGAAACTTGAAGGATGATGAGGAATTTCCGTCAGGTCAGTTAACTTCATCCAAGGATGCAGTAGCAGCTTTAGGTAGCGAACTGCAAGATGAGCAAATATTCGATGTAAAGCTCTTAGCACAAAAAGATCAACATGAACATTCTTCCGCACATGCTAGTGAGGACACGCTTCGCAAAAATACGGATAGAATTACTTCTTCGCTGGATAAATTTGACCTGGCTTTGTCAGCAGCAGATAAAAAGGCAAAGAGCGTCTGTAATCTTGAAAGAGGATCAGATAATGAGAATTTGGGCTCTTCCATGGAACAAGCAATGGAAAATCATGTAGAAAGAGATAACACAAATGTGTTGCTTGAGAAGGAAGGCAGCCAAGATCTGTTTTTCGCACCAACAGCAGTGGTTTCTTGCACAATCAAAGAACAAAGAGAAGCCAAAACTGCTTATGAGGAAGTCATTATGTCTTCTTGCACAATCAAAGAACAAAGAGAAGTCAAAACTGCTTATGAGGAAGTCATTATGTCGAAAAATTTTTCAGCTGAACTTGAATCCGCTGGTGCTCAGGAACCTGTTTCAGTGTTCGATGAATTGAAAACTGTTGTAGAGGAGCACAAAAGCTTGAAAAGGGAATTGACTGAAGCCTACAGGAAAGCCGAAACAACAGAAAGTCAACTGGAGGAAGAAAAGAGGAAAGTTGCCATCATGAATAAAGAGCTCGAGACATTACACAAGCAGATTCTTAAAAATTCAGAATCACGGAACATTCTAGAAGCTGATCTGGATGATGCTACCAGATCACTTGATGAAATGAACAAGAGTGCTTTGTGGCTCTCAAGAGAACTTGAGAATGCCAAATCTAGGTGTGCTGGTCTAGAAGCAGAGAAAGAGATTCTGTGCAGTTCTTTAATTGAACAGAAAAATTTGGCAAAAAATGCGCATGAAGATATTATGGATGCTCAAAACTTCATCATAAGACTTGGTAGCGAGAGGGAGAAACTGGAGAAGAGGTCGGAAACTCTGGAAGAGGAGCTGGCTGCTGCCAAAGGTGAAATATTAAGATTGAGGAGGAAGATTAGCACGGGCCAAGAATACTTGGCCGAGCATCATTCAAAATCTAATGAAGCTCCAGCGGGTTCAACATTCTCTGTTAAAAGAAAAACTTCTGGCAGAAGAAAAAAGAGCTCACCAGGTTCTGATTTTTCTCGATAGAACTTTATTGTTAATGCACTGACTTTCACCCCTATACTAAATAGCTAATGAAGCTCCAGT

Network for GWHGAAEX000827

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.480
SRP064423	SRR2545915	Juvenile tuber	10.860
SRP108465	SRR5643513	five period of Gastrodia elata	4.800
	SRR5643514	five period of Gastrodia elata	6.250
	SRR5643515	five period of Gastrodia elata	4.370
	SRR5643524	five period of Gastrodia elata	5.520
	SRR5643525	five period of Gastrodia elata	5.380
	SRR5643528	five period of Gastrodia elata	7.050
	SRR5643658	five period of Gastrodia elata	10.560
	SRR5643659	five period of Gastrodia elata	2.800
	SRR5643660	five period of Gastrodia elata	3.010
	SRR5643661	five period of Gastrodia elata	4.640
	SRR5643662	five period of Gastrodia elata	3.480
	SRR5643663	five period of Gastrodia elata	3.430
	SRR5643664	five period of Gastrodia elata	3.690
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.890
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.070
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.470
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.230
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.140
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.780
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.350
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.990
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.110
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.330
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.070
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.070
SRP279888	Gastro	Gastrodia elata tuber	5.68
	Juven	Juvenile tuber	6.57
	Mother_Gastro	Mother tuber of Gastrodia elata	12.10
	Mother_Juven	Mother tuber of Juvenile	6.01