Detail information of GWHGAAEX000830/evm.TU.scaffold_100.101


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|311350542|gb|ADP92454.1|7.01E-113GIGANTEA 1 [x Doritaenopsis hybrid cultivar]
Swissprottr|Q9AWL7|GIGAN_ORYSJ1.00E-93Protein GIGANTEA
trEMBLtr|E5LAG2|E5LAG2_9ASPA3.00E-113GIGANTEA 1 {ECO:0000313|EMBL:ADP92454.1}
TAIRAT1G227704.00E-84gigantea protein (GI)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009933539193371035-
Transcript Sequence

Network for GWHGAAEX000830

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12124GI Circadian rhythm - plant map04712

Gene Ontology

GO term OntologyName
GO:2000028Biological Processregulation of photoperiodism, flowering

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.270
SRR2545915Juvenile tuber15.310
SRP108465SRR5643513five period of Gastrodia elata0.680
SRR5643514five period of Gastrodia elata0.260
SRR5643515five period of Gastrodia elata2.220
SRR5643524five period of Gastrodia elata0.700
SRR5643525five period of Gastrodia elata17.240
SRR5643528five period of Gastrodia elata13.860
SRR5643658five period of Gastrodia elata8.620
SRR5643659five period of Gastrodia elata69.210
SRR5643660five period of Gastrodia elata133.160
SRR5643661five period of Gastrodia elata92.700
SRR5643662five period of Gastrodia elata88.560
SRR5643663five period of Gastrodia elata131.060
SRR5643664five period of Gastrodia elata96.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.480
SRR6049655Rhizomagastrodiae_C368-T10_good_11.700
SRR6049656Rhizomagastrodiae_C368-T07_good_10.960
SRR6049657Rhizomagastrodiae_C368-T07_good_10.500
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.960
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.130
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_11.320
SRR6049665Rhizomagastrodiae_C368-T10_good_11.320
SRP279888GastroGastrodia elata tuber 8.68
JuvenJuvenile tuber4.77
Mother_GastroMother tuber of Gastrodia elata 1.29
Mother_JuvenMother tuber of Juvenile 1.44