Detail information of GWHGAAEX000831/evm.TU.scaffold_100.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00132.00E-45Uncharacterized conserved protein
nrgi|661890533|emb|CDP06030.1|6.60E-47unnamed protein product [Coffea canephora]
trEMBLtr|A0A068UBT9|A0A068UBT9_COFCA2.00E-47Coffea canephora
TAIRAT1G534002.00E-45Ubiquitin domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009933711373404107-
Transcript Sequence

Network for GWHGAAEX000831

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16455.4UBD16959.10E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.740
SRR2545915Juvenile tuber7.370
SRP108465SRR5643513five period of Gastrodia elata2.990
SRR5643514five period of Gastrodia elata1.980
SRR5643515five period of Gastrodia elata1.570
SRR5643524five period of Gastrodia elata2.290
SRR5643525five period of Gastrodia elata1.580
SRR5643528five period of Gastrodia elata2.470
SRR5643658five period of Gastrodia elata2.580
SRR5643659five period of Gastrodia elata9.220
SRR5643660five period of Gastrodia elata11.150
SRR5643661five period of Gastrodia elata6.400
SRR5643662five period of Gastrodia elata9.940
SRR5643663five period of Gastrodia elata9.910
SRR5643664five period of Gastrodia elata10.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.480
SRR6049655Rhizomagastrodiae_C368-T10_good_10.630
SRR6049656Rhizomagastrodiae_C368-T07_good_13.530
SRR6049657Rhizomagastrodiae_C368-T07_good_12.080
SRR6049658Rhizomagastrodiae_C368-T04_good_11.560
SRR6049659Rhizomagastrodiae_C368-T04_good_12.040
SRR6049660Rhizomagastrodiae_C368-T01_good_11.830
SRR6049661Rhizomagastrodiae_C368-T04_good_13.740
SRR6049662Rhizomagastrodiae_C368-T01_good_16.190
SRR6049663Rhizomagastrodiae_C368-T01_good_13.180
SRR6049664Rhizomagastrodiae_C368-T10_good_12.710
SRR6049665Rhizomagastrodiae_C368-T10_good_12.710
SRP279888GastroGastrodia elata tuber 4.24
JuvenJuvenile tuber1.91
Mother_GastroMother tuber of Gastrodia elata 1.75
Mother_JuvenMother tuber of Juvenile 1.44