Detail information of GWHGAAEX000837/evm.TU.scaffold_100.108


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743851367|ref|XP_010940117.1|1.33E-57PREDICTED: transcription factor bHLH110-like [Elaeis guineensis]
Swissprottr|Q9SFZ3|BH110_ARATH7.00E-41Transcription factor bHLH110
trEMBLtr|C5XF17|C5XF17_SORBI7.00E-47Putative uncharacterized protein Sb03g008830 {ECO:0000313|EMBL:EES02648.1}
TAIRAT1G276602.00E-40basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009935969053619225-
Transcript Sequence

Network for GWHGAAEX000837

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module14

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.960
SRR2545915Juvenile tuber3.620
SRP108465SRR5643513five period of Gastrodia elata6.900
SRR5643514five period of Gastrodia elata3.930
SRR5643515five period of Gastrodia elata2.230
SRR5643524five period of Gastrodia elata3.950
SRR5643525five period of Gastrodia elata0.910
SRR5643528five period of Gastrodia elata0.470
SRR5643658five period of Gastrodia elata0.630
SRR5643659five period of Gastrodia elata1.280
SRR5643660five period of Gastrodia elata2.460
SRR5643661five period of Gastrodia elata2.750
SRR5643662five period of Gastrodia elata1.810
SRR5643663five period of Gastrodia elata0.690
SRR5643664five period of Gastrodia elata1.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.790
SRR6049655Rhizomagastrodiae_C368-T10_good_110.290
SRR6049656Rhizomagastrodiae_C368-T07_good_13.750
SRR6049657Rhizomagastrodiae_C368-T07_good_11.740
SRR6049658Rhizomagastrodiae_C368-T04_good_11.430
SRR6049659Rhizomagastrodiae_C368-T04_good_10.370
SRR6049660Rhizomagastrodiae_C368-T01_good_11.460
SRR6049661Rhizomagastrodiae_C368-T04_good_13.240
SRR6049662Rhizomagastrodiae_C368-T01_good_16.330
SRR6049663Rhizomagastrodiae_C368-T01_good_12.270
SRR6049664Rhizomagastrodiae_C368-T10_good_19.490
SRR6049665Rhizomagastrodiae_C368-T10_good_19.490
SRP279888GastroGastrodia elata tuber 6.01
JuvenJuvenile tuber6.36
Mother_GastroMother tuber of Gastrodia elata 8.23
Mother_JuvenMother tuber of Juvenile 1.05