Gene detail

Detail information of GWHGAAEX000840/evm.TU.scaffold_100.111

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0431	8.00E-73	Auxilin-like protein and related proteins containing DnaJ domain
nr	gi\|694998056\|ref\|XP_009402578.1\|	1.50E-88	PREDICTED: trichohyalin-like isoform X4 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9FWS1\|AUL1_ARATH	4.00E-73	Auxilin-like protein 1
trEMBL	tr\|M0SEV1\|M0SEV1_MUSAM	7.00E-91	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P15350_001}
TAIR	AT1G75310	8.00E-73	auxin-like 1 protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000099	3681269	3707979	-

Transcript Sequence
>GWHTAAEX000840 ATGGAGGAGATGCAGGGGTCCCGCTTCGCAAGGAGAACTTCTAACGGAGAAGCGAGATCGGCATGCGGCAGAGGGGCGAGGCTGGCGAGCTCAAATGGTTCAAGAATTGATGATTACGTCGAGATCTTCGGAGGATTCGCTGCCTCCTGCAGCATTCCTGTGCTCGTGCTCCCGGACGCCATGAACGGCTGCGAGGAAGAGCTTGCGGGCTCTCAAACCTGTGGTTTGAACTACTTGGACATCTTCGGGGCTCTTGACGCGGGATCCTTCACCTTGGCTTACGAGGACCTTTTGTCCATGGAGAATGGGTCAAAAGAGGAAGGAGAGGAGGATTCCAGTTCCCAAGAAGAGACAGATGTTGGGCATGCGGTTATTGGGGCTTCCGAGTTTGTTGGCCCAGAACTACCAGGGAGTAACCAACTAAACACTGAGGATGAAGTAAATAGCACAGTATGTATATGTAAACCACAGGCTATCTGTAAGCATAATATTGAAGCTGAAACGACATTTCCTATAGGATTTGTGGAAAATAACAGCCTTAGAAAGGTGACAGGTGATGAACATTTTCTTAATGACTATATTGTAAAGGAAAAACAGGCACAAAAACCAACGAGGGAAATCCTTGATAGATGTTTTATGAGTGCCACTGTAAAGGGTTCTGAAAATGATTTGAAAGAGGCCCATGAACCTCTCTTGAAAGATACAAGTTGTGATTTAAAGCAACTCTCCCGCTCCTCTAGTTATCATTCAACTTCAAGTTGGGATATACCATTCTCTGATCATGCGTTTTTTACCATATCAGACATTAACCTCCACACACAACCTTTGGAAGTACCACCTCCCTCGAGAGCACCACCAAAATTGGAAATGAAGCCAGAAATGTCCAAATCTGAGACACTTGAAACTTCAACTATTACATTCAATAAAAGTTACCAAGATCTTCATGTTGGAGGTGCTCTAATATGTCATGCACTTAAGGAGACTCTGAACAGTGCTTCTATTCATTCTAACACGGAGATGGCTGCTAGTAGAACAGCTGCAGCTTCTTCTGCTGCTATGTTAGAAGCAATGGAACTAGCTCAAGCTCGTCTGAAGAGTGCAAAAGAGTTGATGGAAAGAAAGCGGGAGAGTGACAGGAGGCTGGGCCATCATGATTTTTTCACCCGGAATGGACAGAATTATATTTGCACTGAAGATCCCATGAATAAAGCCAAAAAGGAACAAAAGAAATTTTCTAATAAAGAAGAGAGAGTTGCTTCAGCTCTTTCTGAAGATTGTGGAGAAGCAGTCCAAGGGAAAGAATCCATATCTTATAAGCTATCAGCTGAAAAGGAGAGGTCACAGCATTGGAAAGTAGACAAGCAATTCTTTGAGCTCGTAAGCAGTGAGATGTTTGTAAGAGCCAATGTGATCAACCAAGGAAAGTTTAATAGCAATGAAGACATTAAGCTCATGCACCAACATGATGCTTACCCTTACTTCCCAAAAAAGGAATCATTGGTCAACCATGAGCAAATGTTTCTCCAGAATGGTGATGCTAAAGAAGGTGAGAATGTTGTGAGAAACCTCAATAAATTTAGAATAAATGAAATGAAATTGTCTTCAGTTGGTGAATTACAATTGCAGGATGTAAGTGCAAAGAATTTGAAATCTGGTATTCTGATCGAAAAAGAGATCATAAATATATTTGAAACATCTTCATATGGAGATGATGAAGGGAGAGCAAAAACAGGTCAAGCACTTCAGGTTCCTGACATTAACACAAAAAAATTGGTAGATACCTTCTTCTTGCTTCAGCAAGATGGGAATGAAAATGAACCAAAGAATTGCCAGGAATCCTTAAAATGCAGTGATGGTAAAAATAACACTGAGTCTGATACAAGACCCAACATTGCCTGTGGGATGATGAATGGTTCCGTGTCAATAGATTTTTGTAGGGATAGTAAGCATGCTGAATTTGATAGCGGTGAGGCTTCAGAGCAGATGATGGAACAAGGCAAAGAAATGAAGCCTTTTACCTCAGAAGTGGAGGAAATTAGTGAGGCTTCTGTTGTTTTCGAGTATGACACATATAGGTCTAATGAGTGCATGACAATGAATAATGGCAATGTGACTTCTGAATGTGGTTTCTACGAAAAGCTTAAGGGGAACCAATCGTCTAGTTTGAAAAATGAGATTGATGAAGAAGTTGATATAGAAAACTGGATATCATGTTCTAGTGAGAAGGACAAGAACTTGAAAGCTAGCAGAGAAGAATCCCAACCTGGTAGGCAGACAATAAAAAAGACTTGTACTAGTTATAATGATGGGAAGAACTCCGATTTGTTTTGCATTGATAATACTTCTGGGCAGGGAACTGGAACTTCTAGGGACATTAATAAAACCAATGAACCCGAGAAGAAACAAAGGGCTAAATGGAACATACCAAACAAGAGCGAATTGGATGCTGCAAAATTCCTTTTTCAGCCAGTTAGTTCAGAAACGGCAAAGGAATCATTGGACTTTTTGCATAGTGGAGAAATAAGTGTATTTGAACAGCCACAGAAGTTGGAAAATTCTGATGATAGGGCGAGTGTTGTCAGAGAAGAAATAAAGGATGAAAAAAATATACTTGGAAAAGTACAAGCAGCTTTAGAGTTGGAAAAAAAGATTATGGGATTTGGTGTAAGAATCAAGAATTCAGAAGCTGTTCAACAGGCCTGCTCATTGAAGAATATCAGTGGAAACAATCTGAACCCCTCAGTAGACACTTCGAGAAGCTCATTGAAGCAAATGGAGAAGAGGATGCCTGGCGTGCACAGAAGTGTTAACAATAAAAGCAAAGAGTCATTTTGTGCAGAAAGAATGCAGGAGGTTGAGCAAAAGAGGAAATTAGAGGAGGAGAAGGAAAGGGAAAGAGAGAGAGAGAAAGATATGATTGCTGTTGGAAAAGCAACTCAAGAAGGTTGTGAAAGGGTATTTGCTGAAACCAGGGAAAGGCCTGAAATTATTATGGTTGAAAGGGTTTCCTCTGAAGCTCATTCGAGCCCCATCAAAGCATATCGAGATATAGCCGAAAGACCTTTATCTGAAGCGTTTGAAAGGTCTCAAAAGATTGCTTCTGAAGCAAAATTGCGGTCTGAGCGGGCTGCTGTTGAGCGGGCAACAATTGAGGCTAGAGAGCGTGCCATCGAAAGAGCCCTTGCTGAACAATCTTCACTTGCTGCTAGAAAGCACACAGAGACATCAGTTAATGCTTCAAGTGTTAAAAACCTGAAATTAAATGAAACAGAAGGGAATGCTAAACAAGTAGACAATGGCAGTGTGGGCAATCGTAAACCTACATCCGTTTTGCATGATACTTCAACTGACAAGAATTCTTCTCAGAGTGAAGATCGTGAAGGAGAATCACCATTAAGATGCAAAGCAAGGCAAGAGCGGTGCCAGCGAATAGTTGAACGCGCGGCTAAAGCTCTTGCTGAAAAGAACATGAGAGATCTTCTTGCTCAAAGAGAGCAAGCAGAAAGAAATAGGTTAGCGGAACCTCTAGATGCTGACGTTCGGAGGTGGTCAAGCGGAAAAGAAGGAAACTTGCGGGCACTGCTTTCAACGCTACAATATATTCTTGGGCATGACAGTGACTGGCAGCCTATTCCTTTGACTGAGGTTATAACTGCTGATGCTGTCAAGAAAGCTTACAGGAAAGCGACTCTGTATCTTCACCCGGACAAATTGCAGCAAAGAGGCGCAAGCATTCAACAAAAATACATATGCGAAAAGGTCTTTGATCTTCTTAAGGTTAACCTATTCTCTTTCTTACATCTTCCTCCTTCCCTCATTTATAACAGGAGCACTAAAACTTCTCATCCCCACAAATCCCTCCTCCCTCCTCAGAGCCGGGCCCCCAACAGCCGTTGCCGACCTTCGTCATCAGCCACCAACGATAGAAGATCCCCTTTGAATGGGGAAAAAGAGAAGATTACCTCTTTGAACTGGAAAAAGGAGAAGAGATCATCTTTGAACGAGAACATGGAGAAGAGATCTCCTCTGAATGGTGAAGGAGAGAAGAGAACCCTTTTGAACAAAGAAGAACAAAAAGAAAGAGAATGA

Network for GWHGAAEX000840

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX000840
MEEMQGSRFARRTSNGEARSACGRGARLASSNGSRIDDYVEIFGGFAASCSIPVLVLPDAMNGCEEELAGSQTCGLNYLDIFGALDAGSFTLAYEDLLSMENGSKEEGEEDSSSQEETDVGHAVIGASEFVGPELPGSNQLNTEDEVNSTVCICKPQAICKHNIEAETTFPIGFVENNSLRKVTGDEHFLNDYIVKEKQAQKPTREILDRCFMSATVKGSENDLKEAHEPLLKDTSCDLKQLSRSSSYHSTSSWDIPFSDHAFFTISDINLHTQPLEVPPPSRAPPKLEMKPEMSKSETLETSTITFNKSYQDLHVGGALICHALKETLNSASIHSNTEMAASRTAAASSAAMLEAMELAQARLKSAKELMERKRESDRRLGHHDFFTRNGQNYICTEDPMNKAKKEQKKFSNKEERVASALSEDCGEAVQGKESISYKLSAEKERSQHWKVDKQFFELVSSEMFVRANVINQGKFNSNEDIKLMHQHDAYPYFPKKESLVNHEQMFLQNGDAKEGENVVRNLNKFRINEMKLSSVGELQLQDVSAKNLKSGILIEKEIINIFETSSYGDDEGRAKTGQALQVPDINTKKLVDTFFLLQQDGNENEPKNCQESLKCSDGKNNTESDTRPNIACGMMNGSVSIDFCRDSKHAEFDSGEASEQMMEQGKEMKPFTSEVEEISEASVVFEYDTYRSNECMTMNNGNVTSECGFYEKLKGNQSSSLKNEIDEEVDIENWISCSSEKDKNLKASREESQPGRQTIKKTCTSYNDGKNSDLFCIDNTSGQGTGTSRDINKTNEPEKKQRAKWNIPNKSELDAAKFLFQPVSSETAKESLDFLHSGEISVFEQPQKLENSDDRASVVREEIKDEKNILGKVQAALELEKKIMGFGVRIKNSEAVQQACSLKNISGNNLNPSVDTSRSSLKQMEKRMPGVHRSVNNKSKESFCAERMQEVEQKRKLEEEKEREREREKDMIAVGKATQEGCERVFAETRERPEIIMVERVSSEAHSSPIKAYRDIAERPLSEAFERSQKIASEAKLRSERAAVERATIEARERAIERALAEQSSLAARKHTETSVNASSVKNLKLNETEGNAKQVDNGSVGNRKPTSVLHDTSTDKNSSQSEDREGESPLRCKARQERCQRIVERAAKALAEKNMRDLLAQREQAERNRLAEPLDADVRRWSSGKEGNLRALLSTLQYILGHDSDWQPIPLTEVITADAVKKAYRKATLYLHPDKLQQRGASIQQKYICEKVFDLLKVNLFSFLHLPPSLIYNRSTKTSHPHKSLLPPQSRAPNSRCRPSSSATNDRRSPLNGEKEKITSLNWKKEKRSSLNENMEKRSPLNGEGEKRTLLNKEEQKERE

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	41.300
SRP064423	SRR2545915	Juvenile tuber	38.820
SRP108465	SRR5643513	five period of Gastrodia elata	10.630
	SRR5643514	five period of Gastrodia elata	10.980
	SRR5643515	five period of Gastrodia elata	9.780
	SRR5643524	five period of Gastrodia elata	10.060
	SRR5643525	five period of Gastrodia elata	8.930
	SRR5643528	five period of Gastrodia elata	8.100
	SRR5643658	five period of Gastrodia elata	9.510
	SRR5643659	five period of Gastrodia elata	18.630
	SRR5643660	five period of Gastrodia elata	20.060
	SRR5643661	five period of Gastrodia elata	17.470
	SRR5643662	five period of Gastrodia elata	14.500
	SRR5643663	five period of Gastrodia elata	15.860
	SRR5643664	five period of Gastrodia elata	14.960
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.770
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.610
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.380
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.050
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.480
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	16.420
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.420
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.370
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.250
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.850
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.330
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.330
SRP279888	Gastro	Gastrodia elata tuber	21.88
	Juven	Juvenile tuber	33.25
	Mother_Gastro	Mother tuber of Gastrodia elata	11.66
	Mother_Juven	Mother tuber of Juvenile	25.42