Detail information of GWHGAAEX000842/evm.TU.scaffold_100.113


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|257791376|ref|YP_003181982.1|2.00E-07beta-lactamase domain-containing protein [Eggerthella lenta DSM 2243]
KOGKOG13613.00E-106Predicted hydrolase involved in interstrand cross-link repair
nrgi|672181358|ref|XP_008810895.1|0PREDICTED: protein artemis [Phoenix dactylifera]
Swissprottr|Q38961|SNM1_ARATH1.00E-18DNA cross-link repair protein SNM1
trEMBLtr|F6I0E5|F6I0E5_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB60411.1}
TAIRAT1G190203.00E-106Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009937200483734334-
Transcript Sequence

Network for GWHGAAEX000842

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12706.6Lactamase_B_2271234.90E-07
PF07522.13DRMBL2283271.10E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.660
SRR2545915Juvenile tuber66.320
SRP108465SRR5643513five period of Gastrodia elata19.060
SRR5643514five period of Gastrodia elata15.380
SRR5643515five period of Gastrodia elata14.770
SRR5643524five period of Gastrodia elata15.150
SRR5643525five period of Gastrodia elata32.020
SRR5643528five period of Gastrodia elata40.930
SRR5643658five period of Gastrodia elata23.440
SRR5643659five period of Gastrodia elata29.000
SRR5643660five period of Gastrodia elata31.240
SRR5643661five period of Gastrodia elata29.810
SRR5643662five period of Gastrodia elata29.160
SRR5643663five period of Gastrodia elata35.940
SRR5643664five period of Gastrodia elata35.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.890
SRR6049655Rhizomagastrodiae_C368-T10_good_116.800
SRR6049656Rhizomagastrodiae_C368-T07_good_115.580
SRR6049657Rhizomagastrodiae_C368-T07_good_123.180
SRR6049658Rhizomagastrodiae_C368-T04_good_114.070
SRR6049659Rhizomagastrodiae_C368-T04_good_112.790
SRR6049660Rhizomagastrodiae_C368-T01_good_113.240
SRR6049661Rhizomagastrodiae_C368-T04_good_111.520
SRR6049662Rhizomagastrodiae_C368-T01_good_19.960
SRR6049663Rhizomagastrodiae_C368-T01_good_18.210
SRR6049664Rhizomagastrodiae_C368-T10_good_113.110
SRR6049665Rhizomagastrodiae_C368-T10_good_113.110
SRP279888GastroGastrodia elata tuber 30.30
JuvenJuvenile tuber59.53
Mother_GastroMother tuber of Gastrodia elata 22.39
Mother_JuvenMother tuber of Juvenile 71.01