Detail information of GWHGAAEX000844/evm.TU.scaffold_100.116


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47562.00E-42Mitochondrial ribosomal protein L27
nrgi|672128902|ref|XP_008787946.1|4.95E-50PREDICTED: 39S ribosomal protein L41-B, mitochondrial-like [Phoenix dactylifera]
trEMBLtr|C5YSE6|C5YSE6_SORBI1.00E-48Putative uncharacterized protein Sb08g021960 {ECO:0000313|EMBL:EES16399.1}
TAIRAT5G400802.00E-42Mitochondrial ribosomal protein L27

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009937500273758038-
Transcript Sequence

Network for GWHGAAEX000844

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09809.8MRP-L27921542.70E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.700
SRR2545915Juvenile tuber30.670
SRP108465SRR5643513five period of Gastrodia elata31.790
SRR5643514five period of Gastrodia elata23.990
SRR5643515five period of Gastrodia elata25.630
SRR5643524five period of Gastrodia elata26.770
SRR5643525five period of Gastrodia elata17.480
SRR5643528five period of Gastrodia elata23.060
SRR5643658five period of Gastrodia elata17.820
SRR5643659five period of Gastrodia elata17.950
SRR5643660five period of Gastrodia elata20.110
SRR5643661five period of Gastrodia elata16.260
SRR5643662five period of Gastrodia elata13.120
SRR5643663five period of Gastrodia elata14.440
SRR5643664five period of Gastrodia elata9.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.610
SRR6049655Rhizomagastrodiae_C368-T10_good_113.990
SRR6049656Rhizomagastrodiae_C368-T07_good_114.240
SRR6049657Rhizomagastrodiae_C368-T07_good_17.120
SRR6049658Rhizomagastrodiae_C368-T04_good_19.520
SRR6049659Rhizomagastrodiae_C368-T04_good_110.280
SRR6049660Rhizomagastrodiae_C368-T01_good_18.420
SRR6049661Rhizomagastrodiae_C368-T04_good_18.650
SRR6049662Rhizomagastrodiae_C368-T01_good_112.200
SRR6049663Rhizomagastrodiae_C368-T01_good_113.420
SRR6049664Rhizomagastrodiae_C368-T10_good_113.190
SRR6049665Rhizomagastrodiae_C368-T10_good_113.190
SRP279888GastroGastrodia elata tuber 4.00
JuvenJuvenile tuber3.59
Mother_GastroMother tuber of Gastrodia elata 5.75
Mother_JuvenMother tuber of Juvenile 5.22