Detail information of GWHGAAEX000845/evm.TU.scaffold_100.118


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|256822798|ref|YP_003146761.1|7.00E-25redoxin domain-containing protein [Kangiella koreensis DSM 16069]
KOGKOG05412.00E-27Alkyl hydroperoxide reductase/peroxiredoxin
nrgi|695073274|ref|XP_009383796.1|7.23E-52PREDICTED: peroxiredoxin-2E-2, chloroplastic-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q7F8S5|PR2E2_ORYSJ4.00E-32Peroxiredoxin-2E-2, chloroplastic (Precursor)
trEMBLtr|D5ACS5|D5ACS5_PICSI2.00E-48Putative uncharacterized protein {ECO:0000313|EMBL:ADE77344.1}
TAIRAT3G529602.00E-27Thioredoxin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009938218433843202+
Transcript Sequence

Network for GWHGAAEX000845

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08534.9Redoxin1002492.00E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.570
SRR2545915Juvenile tuber5.820
SRP108465SRR5643513five period of Gastrodia elata6.690
SRR5643514five period of Gastrodia elata9.720
SRR5643515five period of Gastrodia elata7.710
SRR5643524five period of Gastrodia elata8.050
SRR5643525five period of Gastrodia elata4.670
SRR5643528five period of Gastrodia elata2.260
SRR5643658five period of Gastrodia elata2.590
SRR5643659five period of Gastrodia elata10.980
SRR5643660five period of Gastrodia elata13.040
SRR5643661five period of Gastrodia elata12.870
SRR5643662five period of Gastrodia elata11.300
SRR5643663five period of Gastrodia elata9.110
SRR5643664five period of Gastrodia elata12.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.080
SRR6049655Rhizomagastrodiae_C368-T10_good_126.250
SRR6049656Rhizomagastrodiae_C368-T07_good_120.890
SRR6049657Rhizomagastrodiae_C368-T07_good_113.800
SRR6049658Rhizomagastrodiae_C368-T04_good_113.230
SRR6049659Rhizomagastrodiae_C368-T04_good_19.270
SRR6049660Rhizomagastrodiae_C368-T01_good_118.590
SRR6049661Rhizomagastrodiae_C368-T04_good_115.900
SRR6049662Rhizomagastrodiae_C368-T01_good_124.830
SRR6049663Rhizomagastrodiae_C368-T01_good_118.430
SRR6049664Rhizomagastrodiae_C368-T10_good_118.820
SRR6049665Rhizomagastrodiae_C368-T10_good_118.820
SRP279888GastroGastrodia elata tuber 14.55
JuvenJuvenile tuber14.30
Mother_GastroMother tuber of Gastrodia elata 10.60
Mother_JuvenMother tuber of Juvenile 7.57