Detail information of GWHGAAEX000859/evm.TU.scaffold_101.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383764682|ref|YP_005443664.1|2.00E-15hypothetical protein CLDAP_37270 [Caldilinea aerophila DSM 14535 = NBRC 104270]
nrgi|743763783|ref|XP_010912091.1|2.27E-142PREDICTED: uncharacterized protein LOC105038101 [Elaeis guineensis]
trEMBLtr|M0TMZ7|M0TMZ7_MUSAM1.00E-138Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P05940_001}
TAIRAT2G480301.00E-131DNAse I-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000096926423935576-
Transcript Sequence

Network for GWHGAAEX000859

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03372.22Exo_endo_phos893222.30E-11
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.340
SRR2545915Juvenile tuber4.880
SRP108465SRR5643513five period of Gastrodia elata8.150
SRR5643514five period of Gastrodia elata5.090
SRR5643515five period of Gastrodia elata1.960
SRR5643524five period of Gastrodia elata4.320
SRR5643525five period of Gastrodia elata0.060
SRR5643528five period of Gastrodia elata0.190
SRR5643658five period of Gastrodia elata0.050
SRR5643659five period of Gastrodia elata0.880
SRR5643660five period of Gastrodia elata1.130
SRR5643661five period of Gastrodia elata1.390
SRR5643662five period of Gastrodia elata1.820
SRR5643663five period of Gastrodia elata0.740
SRR5643664five period of Gastrodia elata1.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.810
SRR6049655Rhizomagastrodiae_C368-T10_good_13.630
SRR6049656Rhizomagastrodiae_C368-T07_good_17.510
SRR6049657Rhizomagastrodiae_C368-T07_good_15.020
SRR6049658Rhizomagastrodiae_C368-T04_good_13.490
SRR6049659Rhizomagastrodiae_C368-T04_good_14.060
SRR6049660Rhizomagastrodiae_C368-T01_good_13.190
SRR6049661Rhizomagastrodiae_C368-T04_good_15.420
SRR6049662Rhizomagastrodiae_C368-T01_good_16.130
SRR6049663Rhizomagastrodiae_C368-T01_good_15.530
SRR6049664Rhizomagastrodiae_C368-T10_good_17.230
SRR6049665Rhizomagastrodiae_C368-T10_good_17.230
SRP279888GastroGastrodia elata tuber 2.91
JuvenJuvenile tuber1.67
Mother_GastroMother tuber of Gastrodia elata 1.37
Mother_JuvenMother tuber of Juvenile 1.77