Detail information of GWHGAAEX000880/evm.TU.scaffold_1013.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33159.00E-27Transport protein particle (TRAPP) complex subunit
nrgi|449445664|ref|XP_004140592.1|1.67E-27PREDICTED: trafficking protein particle complex subunit 5-like [Cucumis sativus]
trEMBLtr|A0A0A0KA36|A0A0A0KA36_CUCSA6.00E-28Uncharacterized protein {ECO:0000313|EMBL:KGN46343.1}
TAIRAT5G580309.00E-27Transport protein particle (TRAPP) component

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000100568169628+
Transcript Sequence

Network for GWHGAAEX000880

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04051.15TRAPP6502.00E-11
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms231.640
SRR2545915Juvenile tuber323.320
SRP108465SRR5643513five period of Gastrodia elata47756.700
SRR5643514five period of Gastrodia elata116500.000
SRR5643515five period of Gastrodia elata69397.000
SRR5643524five period of Gastrodia elata33530.000
SRR5643525five period of Gastrodia elata280451.000
SRR5643528five period of Gastrodia elata40031.000
SRR5643658five period of Gastrodia elata17004.800
SRR5643659five period of Gastrodia elata76190.400
SRR5643660five period of Gastrodia elata114198.000
SRR5643661five period of Gastrodia elata73448.300
SRR5643662five period of Gastrodia elata129118.000
SRR5643663five period of Gastrodia elata80426.800
SRR5643664five period of Gastrodia elata62108.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1415.040
SRR6049655Rhizomagastrodiae_C368-T10_good_1168.010
SRR6049656Rhizomagastrodiae_C368-T07_good_1433.510
SRR6049657Rhizomagastrodiae_C368-T07_good_1476.300
SRR6049658Rhizomagastrodiae_C368-T04_good_165.710
SRR6049659Rhizomagastrodiae_C368-T04_good_1163.060
SRR6049660Rhizomagastrodiae_C368-T01_good_1240.850
SRR6049661Rhizomagastrodiae_C368-T04_good_1124.290
SRR6049662Rhizomagastrodiae_C368-T01_good_1256.220
SRR6049663Rhizomagastrodiae_C368-T01_good_195.050
SRR6049664Rhizomagastrodiae_C368-T10_good_1353.020
SRR6049665Rhizomagastrodiae_C368-T10_good_1353.020
SRP279888GastroGastrodia elata tuber 251,959.33
JuvenJuvenile tuber294,263.67
Mother_GastroMother tuber of Gastrodia elata 122,834.43
Mother_JuvenMother tuber of Juvenile 180,023.33