Detail information of GWHGAAEX000881/evm.TU.scaffold_102.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|731435104|ref|XP_010645305.1|4.45E-65PREDICTED: transcription factor bHLH74 isoform X3 [Vitis vinifera]
Swissprottr|Q6NKN9|BH074_ARATH4.00E-52Transcription factor bHLH74
trEMBLtr|D7UE77|D7UE77_VITVI2.00E-63Putative uncharacterized protein {ECO:0000313|EMBL:CBI41042.3}
TAIRAT1G101201.00E-51basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000108338580290+
Transcript Sequence

Network for GWHGAAEX000881

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH2352831.70E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.080
SRP108465SRR5643513five period of Gastrodia elata0.150
SRR5643514five period of Gastrodia elata0.400
SRR5643515five period of Gastrodia elata0.420
SRR5643524five period of Gastrodia elata0.190
SRR5643525five period of Gastrodia elata8.920
SRR5643528five period of Gastrodia elata1.760
SRR5643658five period of Gastrodia elata1.960
SRR5643659five period of Gastrodia elata0.680
SRR5643660five period of Gastrodia elata0.200
SRR5643661five period of Gastrodia elata0.690
SRR5643662five period of Gastrodia elata0.680
SRR5643663five period of Gastrodia elata1.190
SRR5643664five period of Gastrodia elata0.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.730
SRR6049655Rhizomagastrodiae_C368-T10_good_10.380
SRR6049656Rhizomagastrodiae_C368-T07_good_10.500
SRR6049657Rhizomagastrodiae_C368-T07_good_10.300
SRR6049658Rhizomagastrodiae_C368-T04_good_10.130
SRR6049659Rhizomagastrodiae_C368-T04_good_10.150
SRR6049660Rhizomagastrodiae_C368-T01_good_10.110
SRR6049661Rhizomagastrodiae_C368-T04_good_10.480
SRR6049662Rhizomagastrodiae_C368-T01_good_10.520
SRR6049663Rhizomagastrodiae_C368-T01_good_10.150
SRR6049664Rhizomagastrodiae_C368-T10_good_11.080
SRR6049665Rhizomagastrodiae_C368-T10_good_11.080
SRP279888GastroGastrodia elata tuber 2.43
JuvenJuvenile tuber0.36
Mother_GastroMother tuber of Gastrodia elata 0.12
Mother_JuvenMother tuber of Juvenile 0.23