Detail information of GWHGAAEX000887/evm.TU.scaffold_102.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27731.00E-119Apoptosis antagonizing transcription factor/protein transport protein
nrgi|743778435|ref|XP_010919679.1|1.36E-170PREDICTED: protein AATF isoform X2 [Elaeis guineensis]
trEMBLtr|M0U1K4|M0U1K4_MUSAM4.00E-152Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P18970_001}
TAIRAT5G613301.00E-119rRNA processing protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000108375492404330-
Transcript Sequence

Network for GWHGAAEX000887

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13339.5AATF-Che1752075.40E-30
PF08164.11TRAUB2863611.60E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.390
SRR2545915Juvenile tuber52.730
SRP108465SRR5643513five period of Gastrodia elata33.910
SRR5643514five period of Gastrodia elata33.840
SRR5643515five period of Gastrodia elata33.380
SRR5643524five period of Gastrodia elata32.370
SRR5643525five period of Gastrodia elata41.150
SRR5643528five period of Gastrodia elata44.950
SRR5643658five period of Gastrodia elata49.450
SRR5643659five period of Gastrodia elata30.470
SRR5643660five period of Gastrodia elata31.930
SRR5643661five period of Gastrodia elata32.520
SRR5643662five period of Gastrodia elata28.450
SRR5643663five period of Gastrodia elata28.040
SRR5643664five period of Gastrodia elata27.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.530
SRR6049655Rhizomagastrodiae_C368-T10_good_130.080
SRR6049656Rhizomagastrodiae_C368-T07_good_139.240
SRR6049657Rhizomagastrodiae_C368-T07_good_136.050
SRR6049658Rhizomagastrodiae_C368-T04_good_150.770
SRR6049659Rhizomagastrodiae_C368-T04_good_149.430
SRR6049660Rhizomagastrodiae_C368-T01_good_136.530
SRR6049661Rhizomagastrodiae_C368-T04_good_142.410
SRR6049662Rhizomagastrodiae_C368-T01_good_144.630
SRR6049663Rhizomagastrodiae_C368-T01_good_145.520
SRR6049664Rhizomagastrodiae_C368-T10_good_142.280
SRR6049665Rhizomagastrodiae_C368-T10_good_142.280
SRP279888GastroGastrodia elata tuber 50.28
JuvenJuvenile tuber51.45
Mother_GastroMother tuber of Gastrodia elata 62.45
Mother_JuvenMother tuber of Juvenile 63.78